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Protein

Protein SET DOMAIN GROUP 41

Gene

SDG41

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionMethyltransferase, Transferase
LigandS-adenosyl-L-methionine

Names & Taxonomyi

Protein namesi
Recommended name:
Protein SET DOMAIN GROUP 41 (EC:2.1.1.-)
Gene namesi
Name:SDG41
Synonyms:SET41
Ordered Locus Names:At1g43245
ORF Names:F1I21
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G43245
TAIRilocus:504956288 AT1G43245

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002342861 – 558Protein SET DOMAIN GROUP 41Add BLAST558

Proteomic databases

PaxDbiQ3ECY6

Expressioni

Gene expression databases

ExpressionAtlasiQ3ECY6 baseline and differential

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G43245.1

Structurei

3D structure databases

ProteinModelPortaliQ3ECY6
SMRiQ3ECY6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini115 – 249SETPROSITE-ProRule annotationAdd BLAST135

Sequence similaritiesi

Belongs to the class V-like SAM-binding methyltransferase superfamily.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG410IWFG Eukaryota
ENOG410YN9S LUCA
HOGENOMiHOG000154276
InParanoidiQ3ECY6
KOiK11426
OMAiTWSFLTR
OrthoDBiEOG09360FIJ
PhylomeDBiQ3ECY6

Family and domain databases

InterProiView protein in InterPro
IPR001214 SET_dom
PfamiView protein in Pfam
PF00856 SET, 1 hit
PROSITEiView protein in PROSITE
PS50280 SET, 1 hit

Sequencei

Sequence statusi: Complete.

Q3ECY6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEIRAAEDIE IRTDLFPPLS PLASSLYDSF LSSHCSSCFS LLPPSPPQPL
60 70 80 90 100
YCSAACSLTD SFTNSPQFPP EITPILPSDI RTSLHLLNST AVDTSSSPHR
110 120 130 140 150
LNNLLTNHHL LMADPSISVA IHHAANFIAT VIRSNRKNTE LEEAAICAVL
160 170 180 190 200
TNAVEVHDSN GLALGIALYN SSFSWINHSC SPNSCYRFVN NRTSYHDVHV
210 220 230 240 250
TNTETSSNLE LQEQVCGTSL NSGNGNGPKL IVRSIKRIKS GEEITVSYID
260 270 280 290 300
LLQPTGLRQS DLWSKYRFMC NCGRCAASPP AYVDSILEGV LTLESEKTTV
310 320 330 340 350
GHFDGSTNKD EAVGKMNDYI QEAIDDFLSD NIDPKTCCEM IESVLHHGIQ
360 370 380 390 400
FKEDSQPHCL RLHACHYVAL NAYITLATAY RIRSIDSETG IVCDMSRISA
410 420 430 440 450
AYSLFLAGVS HHLFCAERSF AISAAKFWKN AGELLFDLAP KLLMELSVES
460 470 480 490 500
DVKCTKCLML ETSNSHRDIK EKSRQILSCV RDISQVTWSF LTRGCPYLEK
510 520 530 540 550
FRSPVDFSLT RTNGEREESS KDQTVNVLLL SSHCLLYADL LTDLCYGQKS

HLVSRFRL
Length:558
Mass (Da):61,927
Last modified:November 8, 2005 - v1
Checksum:i5CFF00CE3653FD63
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005687 Genomic DNA No translation available.
CP002684 Genomic DNA Translation: AEE31964.1
RefSeqiNP_683372.2, NM_148531.3
UniGeneiAt.49948

Genome annotation databases

EnsemblPlantsiAT1G43245.1; AT1G43245.1; AT1G43245
GeneIDi840925
GrameneiAT1G43245.1; AT1G43245.1; AT1G43245
KEGGiath:AT1G43245

Similar proteinsi

Entry informationi

Entry nameiSDG41_ARATH
AccessioniPrimary (citable) accession number: Q3ECY6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 16, 2006
Last sequence update: November 8, 2005
Last modified: April 25, 2018
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health