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Q3ECY6

- SDG41_ARATH

UniProt

Q3ECY6 - SDG41_ARATH

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Protein
Protein SET DOMAIN GROUP 41
Gene
SDG41, SET41, At1g43245, F1I21
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. methyltransferase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Ligandi

S-adenosyl-L-methionine

Names & Taxonomyi

Protein namesi
Recommended name:
Protein SET DOMAIN GROUP 41 (EC:2.1.1.-)
Gene namesi
Name:SDG41
Synonyms:SET41
Ordered Locus Names:At1g43245
ORF Names:F1I21
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 1

Organism-specific databases

TAIRiAT1G43245.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 558558Protein SET DOMAIN GROUP 41
PRO_0000234286Add
BLAST

Proteomic databases

PRIDEiQ3ECY6.

Expressioni

Gene expression databases

GenevestigatoriQ3ECY6.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G43245.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ3ECY6.
SMRiQ3ECY6. Positions 152-275.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini115 – 249135SET
Add
BLAST

Sequence similaritiesi

Contains 1 SET domain.

Phylogenomic databases

eggNOGiNOG327953.
HOGENOMiHOG000154276.
InParanoidiQ3ECY6.
KOiK11426.
OMAiDEVCITY.
PhylomeDBiQ3ECY6.

Family and domain databases

InterProiIPR001214. SET_dom.
[Graphical view]
PfamiPF00856. SET. 1 hit.
[Graphical view]
PROSITEiPS50280. SET. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3ECY6-1 [UniParc]FASTAAdd to Basket

« Hide

MEIRAAEDIE IRTDLFPPLS PLASSLYDSF LSSHCSSCFS LLPPSPPQPL    50
YCSAACSLTD SFTNSPQFPP EITPILPSDI RTSLHLLNST AVDTSSSPHR 100
LNNLLTNHHL LMADPSISVA IHHAANFIAT VIRSNRKNTE LEEAAICAVL 150
TNAVEVHDSN GLALGIALYN SSFSWINHSC SPNSCYRFVN NRTSYHDVHV 200
TNTETSSNLE LQEQVCGTSL NSGNGNGPKL IVRSIKRIKS GEEITVSYID 250
LLQPTGLRQS DLWSKYRFMC NCGRCAASPP AYVDSILEGV LTLESEKTTV 300
GHFDGSTNKD EAVGKMNDYI QEAIDDFLSD NIDPKTCCEM IESVLHHGIQ 350
FKEDSQPHCL RLHACHYVAL NAYITLATAY RIRSIDSETG IVCDMSRISA 400
AYSLFLAGVS HHLFCAERSF AISAAKFWKN AGELLFDLAP KLLMELSVES 450
DVKCTKCLML ETSNSHRDIK EKSRQILSCV RDISQVTWSF LTRGCPYLEK 500
FRSPVDFSLT RTNGEREESS KDQTVNVLLL SSHCLLYADL LTDLCYGQKS 550
HLVSRFRL 558
Length:558
Mass (Da):61,927
Last modified:November 8, 2005 - v1
Checksum:i5CFF00CE3653FD63
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC005687 Genomic DNA. No translation available.
CP002684 Genomic DNA. Translation: AEE31964.1.
RefSeqiNP_683372.2. NM_148531.2.
UniGeneiAt.49948.

Genome annotation databases

EnsemblPlantsiAT1G43245.1; AT1G43245.1; AT1G43245.
GeneIDi840925.
KEGGiath:AT1G43245.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC005687 Genomic DNA. No translation available.
CP002684 Genomic DNA. Translation: AEE31964.1 .
RefSeqi NP_683372.2. NM_148531.2.
UniGenei At.49948.

3D structure databases

ProteinModelPortali Q3ECY6.
SMRi Q3ECY6. Positions 152-275.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3702.AT1G43245.1-P.

Proteomic databases

PRIDEi Q3ECY6.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT1G43245.1 ; AT1G43245.1 ; AT1G43245 .
GeneIDi 840925.
KEGGi ath:AT1G43245.

Organism-specific databases

TAIRi AT1G43245.

Phylogenomic databases

eggNOGi NOG327953.
HOGENOMi HOG000154276.
InParanoidi Q3ECY6.
KOi K11426.
OMAi DEVCITY.
PhylomeDBi Q3ECY6.

Gene expression databases

Genevestigatori Q3ECY6.

Family and domain databases

InterProi IPR001214. SET_dom.
[Graphical view ]
Pfami PF00856. SET. 1 hit.
[Graphical view ]
PROSITEi PS50280. SET. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.

Entry informationi

Entry nameiSDG41_ARATH
AccessioniPrimary (citable) accession number: Q3ECY6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 16, 2006
Last sequence update: November 8, 2005
Last modified: May 14, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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