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Q3ECY6

- SDG41_ARATH

UniProt

Q3ECY6 - SDG41_ARATH

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Protein

Protein SET DOMAIN GROUP 41

Gene

SDG41

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. methyltransferase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Ligandi

S-adenosyl-L-methionine

Names & Taxonomyi

Protein namesi
Recommended name:
Protein SET DOMAIN GROUP 41 (EC:2.1.1.-)
Gene namesi
Name:SDG41
Synonyms:SET41
Ordered Locus Names:At1g43245
ORF Names:F1I21
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 1

Organism-specific databases

TAIRiAT1G43245.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 558558Protein SET DOMAIN GROUP 41PRO_0000234286Add
BLAST

Proteomic databases

PRIDEiQ3ECY6.

Expressioni

Gene expression databases

GenevestigatoriQ3ECY6.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G43245.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ3ECY6.
SMRiQ3ECY6. Positions 152-275.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini115 – 249135SETPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class V-like SAM-binding methyltransferase superfamily.PROSITE-ProRule annotation
Contains 1 SET domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiNOG327953.
HOGENOMiHOG000154276.
InParanoidiQ3ECY6.
KOiK11426.
OMAiDEVCITY.
PhylomeDBiQ3ECY6.

Family and domain databases

InterProiIPR001214. SET_dom.
[Graphical view]
PfamiPF00856. SET. 1 hit.
[Graphical view]
PROSITEiPS50280. SET. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3ECY6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEIRAAEDIE IRTDLFPPLS PLASSLYDSF LSSHCSSCFS LLPPSPPQPL
60 70 80 90 100
YCSAACSLTD SFTNSPQFPP EITPILPSDI RTSLHLLNST AVDTSSSPHR
110 120 130 140 150
LNNLLTNHHL LMADPSISVA IHHAANFIAT VIRSNRKNTE LEEAAICAVL
160 170 180 190 200
TNAVEVHDSN GLALGIALYN SSFSWINHSC SPNSCYRFVN NRTSYHDVHV
210 220 230 240 250
TNTETSSNLE LQEQVCGTSL NSGNGNGPKL IVRSIKRIKS GEEITVSYID
260 270 280 290 300
LLQPTGLRQS DLWSKYRFMC NCGRCAASPP AYVDSILEGV LTLESEKTTV
310 320 330 340 350
GHFDGSTNKD EAVGKMNDYI QEAIDDFLSD NIDPKTCCEM IESVLHHGIQ
360 370 380 390 400
FKEDSQPHCL RLHACHYVAL NAYITLATAY RIRSIDSETG IVCDMSRISA
410 420 430 440 450
AYSLFLAGVS HHLFCAERSF AISAAKFWKN AGELLFDLAP KLLMELSVES
460 470 480 490 500
DVKCTKCLML ETSNSHRDIK EKSRQILSCV RDISQVTWSF LTRGCPYLEK
510 520 530 540 550
FRSPVDFSLT RTNGEREESS KDQTVNVLLL SSHCLLYADL LTDLCYGQKS

HLVSRFRL
Length:558
Mass (Da):61,927
Last modified:November 8, 2005 - v1
Checksum:i5CFF00CE3653FD63
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005687 Genomic DNA. No translation available.
CP002684 Genomic DNA. Translation: AEE31964.1.
RefSeqiNP_683372.2. NM_148531.2.
UniGeneiAt.49948.

Genome annotation databases

EnsemblPlantsiAT1G43245.1; AT1G43245.1; AT1G43245.
GeneIDi840925.
KEGGiath:AT1G43245.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005687 Genomic DNA. No translation available.
CP002684 Genomic DNA. Translation: AEE31964.1 .
RefSeqi NP_683372.2. NM_148531.2.
UniGenei At.49948.

3D structure databases

ProteinModelPortali Q3ECY6.
SMRi Q3ECY6. Positions 152-275.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3702.AT1G43245.1-P.

Proteomic databases

PRIDEi Q3ECY6.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT1G43245.1 ; AT1G43245.1 ; AT1G43245 .
GeneIDi 840925.
KEGGi ath:AT1G43245.

Organism-specific databases

TAIRi AT1G43245.

Phylogenomic databases

eggNOGi NOG327953.
HOGENOMi HOG000154276.
InParanoidi Q3ECY6.
KOi K11426.
OMAi DEVCITY.
PhylomeDBi Q3ECY6.

Gene expression databases

Genevestigatori Q3ECY6.

Family and domain databases

InterProi IPR001214. SET_dom.
[Graphical view ]
Pfami PF00856. SET. 1 hit.
[Graphical view ]
PROSITEi PS50280. SET. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.

Entry informationi

Entry nameiSDG41_ARATH
AccessioniPrimary (citable) accession number: Q3ECY6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 16, 2006
Last sequence update: November 8, 2005
Last modified: October 1, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3