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Q3ECY6

- SDG41_ARATH

UniProt

Q3ECY6 - SDG41_ARATH

Protein

Protein SET DOMAIN GROUP 41

Gene

SDG41

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 50 (01 Oct 2014)
      Sequence version 1 (08 Nov 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. methyltransferase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    Methyltransferase, Transferase

    Keywords - Ligandi

    S-adenosyl-L-methionine

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein SET DOMAIN GROUP 41 (EC:2.1.1.-)
    Gene namesi
    Name:SDG41
    Synonyms:SET41
    Ordered Locus Names:At1g43245
    ORF Names:F1I21
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 1

    Organism-specific databases

    TAIRiAT1G43245.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 558558Protein SET DOMAIN GROUP 41PRO_0000234286Add
    BLAST

    Proteomic databases

    PRIDEiQ3ECY6.

    Expressioni

    Gene expression databases

    GenevestigatoriQ3ECY6.

    Interactioni

    Protein-protein interaction databases

    STRINGi3702.AT1G43245.1-P.

    Structurei

    3D structure databases

    ProteinModelPortaliQ3ECY6.
    SMRiQ3ECY6. Positions 152-275.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini115 – 249135SETPROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Belongs to the class V-like SAM-binding methyltransferase superfamily.PROSITE-ProRule annotation
    Contains 1 SET domain.PROSITE-ProRule annotation

    Phylogenomic databases

    eggNOGiNOG327953.
    HOGENOMiHOG000154276.
    InParanoidiQ3ECY6.
    KOiK11426.
    OMAiDEVCITY.
    PhylomeDBiQ3ECY6.

    Family and domain databases

    InterProiIPR001214. SET_dom.
    [Graphical view]
    PfamiPF00856. SET. 1 hit.
    [Graphical view]
    PROSITEiPS50280. SET. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q3ECY6-1 [UniParc]FASTAAdd to Basket

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    MEIRAAEDIE IRTDLFPPLS PLASSLYDSF LSSHCSSCFS LLPPSPPQPL    50
    YCSAACSLTD SFTNSPQFPP EITPILPSDI RTSLHLLNST AVDTSSSPHR 100
    LNNLLTNHHL LMADPSISVA IHHAANFIAT VIRSNRKNTE LEEAAICAVL 150
    TNAVEVHDSN GLALGIALYN SSFSWINHSC SPNSCYRFVN NRTSYHDVHV 200
    TNTETSSNLE LQEQVCGTSL NSGNGNGPKL IVRSIKRIKS GEEITVSYID 250
    LLQPTGLRQS DLWSKYRFMC NCGRCAASPP AYVDSILEGV LTLESEKTTV 300
    GHFDGSTNKD EAVGKMNDYI QEAIDDFLSD NIDPKTCCEM IESVLHHGIQ 350
    FKEDSQPHCL RLHACHYVAL NAYITLATAY RIRSIDSETG IVCDMSRISA 400
    AYSLFLAGVS HHLFCAERSF AISAAKFWKN AGELLFDLAP KLLMELSVES 450
    DVKCTKCLML ETSNSHRDIK EKSRQILSCV RDISQVTWSF LTRGCPYLEK 500
    FRSPVDFSLT RTNGEREESS KDQTVNVLLL SSHCLLYADL LTDLCYGQKS 550
    HLVSRFRL 558
    Length:558
    Mass (Da):61,927
    Last modified:November 8, 2005 - v1
    Checksum:i5CFF00CE3653FD63
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC005687 Genomic DNA. No translation available.
    CP002684 Genomic DNA. Translation: AEE31964.1.
    RefSeqiNP_683372.2. NM_148531.2.
    UniGeneiAt.49948.

    Genome annotation databases

    EnsemblPlantsiAT1G43245.1; AT1G43245.1; AT1G43245.
    GeneIDi840925.
    KEGGiath:AT1G43245.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC005687 Genomic DNA. No translation available.
    CP002684 Genomic DNA. Translation: AEE31964.1 .
    RefSeqi NP_683372.2. NM_148531.2.
    UniGenei At.49948.

    3D structure databases

    ProteinModelPortali Q3ECY6.
    SMRi Q3ECY6. Positions 152-275.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3702.AT1G43245.1-P.

    Proteomic databases

    PRIDEi Q3ECY6.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT1G43245.1 ; AT1G43245.1 ; AT1G43245 .
    GeneIDi 840925.
    KEGGi ath:AT1G43245.

    Organism-specific databases

    TAIRi AT1G43245.

    Phylogenomic databases

    eggNOGi NOG327953.
    HOGENOMi HOG000154276.
    InParanoidi Q3ECY6.
    KOi K11426.
    OMAi DEVCITY.
    PhylomeDBi Q3ECY6.

    Gene expression databases

    Genevestigatori Q3ECY6.

    Family and domain databases

    InterProi IPR001214. SET_dom.
    [Graphical view ]
    Pfami PF00856. SET. 1 hit.
    [Graphical view ]
    PROSITEi PS50280. SET. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
      Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
      , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
      Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    2. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.

    Entry informationi

    Entry nameiSDG41_ARATH
    AccessioniPrimary (citable) accession number: Q3ECY6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 16, 2006
    Last sequence update: November 8, 2005
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3