Q3ECY6 (SDG41_ARATH) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Protein SET DOMAIN GROUP 41

Gene names

Name:	SDG41
Synonyms:	SET41
Ordered Locus Names:	At1g43245
ORF Names:	F1I21

Organism

Arabidopsis thaliana (Mouse-ear cress) [Reference proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	558 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 SET domain.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 558	558	Protein SET DOMAIN GROUP 41		PRO_0000234286
Regions
	Domain	98 – 253	156	SET

Sequences

	Sequence		Length	Mass (Da)
	Q3ECY6 [UniParc]. Last modified November 8, 2005. Version 1. Checksum: 5CFF00CE3653FD63	FASTA	558	61,927
	10 20 30 40 50 60 MEIRAAEDIE IRTDLFPPLS PLASSLYDSF LSSHCSSCFS LLPPSPPQPL YCSAACSLTD 70 80 90 100 110 120 SFTNSPQFPP EITPILPSDI RTSLHLLNST AVDTSSSPHR LNNLLTNHHL LMADPSISVA 130 140 150 160 170 180 IHHAANFIAT VIRSNRKNTE LEEAAICAVL TNAVEVHDSN GLALGIALYN SSFSWINHSC 190 200 210 220 230 240 SPNSCYRFVN NRTSYHDVHV TNTETSSNLE LQEQVCGTSL NSGNGNGPKL IVRSIKRIKS 250 260 270 280 290 300 GEEITVSYID LLQPTGLRQS DLWSKYRFMC NCGRCAASPP AYVDSILEGV LTLESEKTTV 310 320 330 340 350 360 GHFDGSTNKD EAVGKMNDYI QEAIDDFLSD NIDPKTCCEM IESVLHHGIQ FKEDSQPHCL 370 380 390 400 410 420 RLHACHYVAL NAYITLATAY RIRSIDSETG IVCDMSRISA AYSLFLAGVS HHLFCAERSF 430 440 450 460 470 480 AISAAKFWKN AGELLFDLAP KLLMELSVES DVKCTKCLML ETSNSHRDIK EKSRQILSCV 490 500 510 520 530 540 RDISQVTWSF LTRGCPYLEK FRSPVDFSLT RTNGEREESS KDQTVNVLLL SSHCLLYADL 550 LTDLCYGQKS HLVSRFRL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana." Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W. Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC005687 Genomic DNA. No translation available. CP002684 Genomic DNA. Translation: AEE31964.1.
IPI	IPI00516245.
RefSeq	NP_683372.2. NM_148531.2.
UniGene	At.49948.
3D structure databases
ProteinModelPortal	Q3ECY6.
SMR	Q3ECY6. Positions 152-275.
ModBase	Search...
Protein-protein interaction databases
STRING	3702.AT1G43245.1-P.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT1G43245.1; AT1G43245.1; AT1G43245.
GeneID	840925.
KEGG	ath:AT1G43245.
Organism-specific databases
TAIR	At1g43245.
Phylogenomic databases
eggNOG	NOG327953.
HOGENOM	HOG000154276.
InParanoid	Q3ECY6.
KO	K11426.
OMA	RQSDLWS.
PhylomeDB	Q3ECY6.
ProtClustDB	CLSN2681236.
Gene expression databases
Genevestigator	Q3ECY6.
Family and domain databases
InterPro	IPR001214. SET_dom. [Graphical view]
Pfam	PF00856. SET. 1 hit. [Graphical view]
PROSITE	PS50280. SET. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

SDG41_ARATH

Accession

Primary (citable) accession number: Q3ECY6

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 16, 2006
Last sequence update:	November 8, 2005
Last modified:	May 1, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program