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Protein
Submitted name:

Histone H1-3

Gene

HIS1-3

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Histone H1-3Imported
Gene namesi
Name:HIS1-3Imported
Ordered Locus Names:At2g18050Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

TAIRiAT2G18050.

Subcellular locationi

  • Nucleus UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

ChromosomeUniRule annotation, NucleusUniRule annotation

PTM / Processingi

Proteomic databases

PaxDbiQ3EBY3.
PRIDEiQ3EBY3.

Expressioni

Gene expression databases

ExpressionAtlasiQ3EBY3. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G18050.1.

Structurei

3D structure databases

ProteinModelPortaliQ3EBY3.
SMRiQ3EBY3. Positions 1-63.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 6464H15 (linker histone H1/H5 globular)InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the histone H1/H5 family.UniRule annotation
Contains 1 H15 (linker histone H1/H5 globular) domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG410J1R8. Eukaryota.
ENOG410XWIM. LUCA.
HOGENOMiHOG000241672.
PhylomeDBiQ3EBY3.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005818. Histone_H1/H5_H15.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00538. Linker_histone. 1 hit.
[Graphical view]
SMARTiSM00526. H15. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS51504. H15. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3EBY3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIKEALMVLK EKNGSSPYAI AKKIEEKHKS LLPESFRKTL SLQLKNSVAK
60 70 80 90 100
GKLVKIRASY KLSDTTKMIT RQQDKKNKKN MKQEDKEITK RTRSSSTRPK
110 120 130
KTVSVNKQEK KRKVKKARQP KSIKSSVGKK KAMKASAA
Length:138
Mass (Da):15,715
Last modified:November 8, 2005 - v1
Checksum:i06A6D0997F115BC2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002685 Genomic DNA. Translation: AEC06721.1.
RefSeqiNP_849970.1. NM_179639.1.
UniGeneiAt.24439.

Genome annotation databases

EnsemblPlantsiAT2G18050.2; AT2G18050.2; AT2G18050.
GeneIDi816317.
GrameneiAT2G18050.2; AT2G18050.2; AT2G18050.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002685 Genomic DNA. Translation: AEC06721.1.
RefSeqiNP_849970.1. NM_179639.1.
UniGeneiAt.24439.

3D structure databases

ProteinModelPortaliQ3EBY3.
SMRiQ3EBY3. Positions 1-63.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT2G18050.1.

Proteomic databases

PaxDbiQ3EBY3.
PRIDEiQ3EBY3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G18050.2; AT2G18050.2; AT2G18050.
GeneIDi816317.
GrameneiAT2G18050.2; AT2G18050.2; AT2G18050.

Organism-specific databases

TAIRiAT2G18050.

Phylogenomic databases

eggNOGiENOG410J1R8. Eukaryota.
ENOG410XWIM. LUCA.
HOGENOMiHOG000241672.
PhylomeDBiQ3EBY3.

Gene expression databases

ExpressionAtlasiQ3EBY3. baseline and differential.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005818. Histone_H1/H5_H15.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00538. Linker_histone. 1 hit.
[Graphical view]
SMARTiSM00526. H15. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS51504. H15. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ3EBY3_ARATH
AccessioniPrimary (citable) accession number: Q3EBY3
Entry historyi
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: September 7, 2016
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.