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Protein

Probable peptide/nitrate transporter At3g43790

Gene

ZIFL2

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • regulation of stomatal closure Source: GO_Central
  • response to nematode Source: TAIR

Keywordsi

Biological processTransport

Protein family/group databases

TCDBi2.A.1.2.96. the major facilitator superfamily (mfs).

Names & Taxonomyi

Protein namesi
Recommended name:
Probable peptide/nitrate transporter At3g43790
Alternative name(s):
Protein ZINC INDUCED FACILITATOR-LIKE 2
Gene namesi
Name:ZIFL2
Ordered Locus Names:At3g43790
ORF Names:T28A8.80
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G43790.
TAIRilocus:2101109. AT3G43790.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei39 – 59HelicalSequence analysisAdd BLAST21
Transmembranei76 – 96HelicalSequence analysisAdd BLAST21
Transmembranei107 – 127HelicalSequence analysisAdd BLAST21
Transmembranei129 – 149HelicalSequence analysisAdd BLAST21
Transmembranei168 – 188HelicalSequence analysisAdd BLAST21
Transmembranei210 – 230HelicalSequence analysisAdd BLAST21
Transmembranei278 – 298HelicalSequence analysisAdd BLAST21
Transmembranei318 – 338HelicalSequence analysisAdd BLAST21
Transmembranei355 – 375HelicalSequence analysisAdd BLAST21
Transmembranei381 – 401HelicalSequence analysisAdd BLAST21
Transmembranei416 – 436HelicalSequence analysisAdd BLAST21
Transmembranei460 – 480HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Disruption phenotypei

No visible phenotype.1 Publication

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003999701 – 484Probable peptide/nitrate transporter At3g43790Add BLAST484

Proteomic databases

PaxDbiQ3EAQ5.

Expressioni

Gene expression databases

ExpressionAtlasiQ3EAQ5. baseline and differential.
GenevisibleiQ3EAQ5. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G43790.2.

Structurei

3D structure databases

ProteinModelPortaliQ3EAQ5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG2615. Eukaryota.
ENOG410XSE0. LUCA.
HOGENOMiHOG000242165.
InParanoidiQ3EAQ5.
OMAiLAIFTYH.
OrthoDBiEOG09360B22.
PhylomeDBiQ3EAQ5.

Family and domain databases

CDDicd06174. MFS. 1 hit.
InterProiView protein in InterPro
IPR011701. MFS.
IPR020846. MFS_dom.
PfamiView protein in Pfam
PF07690. MFS_1. 1 hit.
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiView protein in PROSITE
PS50850. MFS. 1 hit.

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform 1 (identifier: Q3EAQ5-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MADDESRTIL LEKNEDCPGC IIDRTKQQQR GVPYLHLSFI WLVSLCTALP
60 70 80 90 100
ISSLFPYIYF MIRDFHIAKQ EEDIGFYAGF VGSSFMIGRA LTSIFWGKLA
110 120 130 140 150
DRYGRKPIIL IGTFSVIIFN TLFGLSTSFW LAISVRFLLG CFNCLLGVIR
160 170 180 190 200
AYASEVVSEE YNALSLSVVS TSRGIGLILG PAIGGYLAQP AEKYPNIFSQ
210 220 230 240 250
SSVFGRFPYF LPSLVISVYA TAVLIACWWL PETLHTRCRI AQGRLNPTEL
260 270 280 290 300
NDDESRGGGL DEQKIINKPS LLRNRPLMAI IIVYCVFSLQ EIAYNEIFSL
310 320 330 340 350
WAVSDRSYGG LSFSSQDVGE VLAISGLGLL VFQLLVYPPL EKSVGLLAVI
360 370 380 390 400
RLSAVLLIPL LSCYPYIALL SGVTLHLVIN CASIIKNALS ISLVTGLFIM
410 420 430 440 450
LNKAVPQNQR GAANGISMTA MSVFKSFGPA GGGVLFSWAQ KRQDATFLPG
460 470 480
QIFAPCDEMV FLVLNLVQLV GLILTFIPYI SQIQ
Note: Derived from EST data. No experimental confirmation available.
Length:484
Mass (Da):53,275
Last modified:November 2, 2010 - v2
Checksum:i6C9F72151798543D
GO
Isoform 2 (identifier: Q3EAQ5-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     451-456: Missing.

Note: No experimental confirmation available.
Show »
Length:478
Mass (Da):52,615
Checksum:i4068202FBE702886
GO

Sequence cautioni

The sequence CAB83151 differs from that shown. Reason: Erroneous gene model prediction.Curated

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_039950451 – 456Missing in isoform 2. 1 Publication6

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL162691 Genomic DNA. Translation: CAB83151.1. Sequence problems.
CP002686 Genomic DNA. Translation: AEE77827.1.
CP002686 Genomic DNA. Translation: AEE77828.1.
CP002686 Genomic DNA. Translation: AEE77829.1.
CP002686 Genomic DNA. Translation: ANM64408.1.
BT030378 mRNA. Translation: ABO38791.1.
PIRiT47415.
RefSeqiNP_001326438.1. NM_001339105.1. [Q3EAQ5-2]
NP_189965.2. NM_114247.4. [Q3EAQ5-2]
NP_974382.1. NM_202653.1. [Q3EAQ5-1]
NP_974383.1. NM_202654.1. [Q3EAQ5-1]
UniGeneiAt.36230.

Genome annotation databases

EnsemblPlantsiAT3G43790.1; AT3G43790.1; AT3G43790. [Q3EAQ5-2]
AT3G43790.2; AT3G43790.2; AT3G43790. [Q3EAQ5-1]
AT3G43790.3; AT3G43790.3; AT3G43790. [Q3EAQ5-1]
AT3G43790.4; AT3G43790.4; AT3G43790. [Q3EAQ5-2]
GeneIDi823490.
GrameneiAT3G43790.1; AT3G43790.1; AT3G43790.
AT3G43790.2; AT3G43790.2; AT3G43790.
AT3G43790.3; AT3G43790.3; AT3G43790.
AT3G43790.4; AT3G43790.4; AT3G43790.
KEGGiath:AT3G43790.

Keywords - Coding sequence diversityi

Alternative splicing

Similar proteinsi

Entry informationi

Entry nameiPTR36_ARATH
AccessioniPrimary (citable) accession number: Q3EAQ5
Secondary accession number(s): Q9LZG8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 2, 2010
Last sequence update: November 2, 2010
Last modified: August 30, 2017
This is version 80 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families