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Q3E9A4 (GLYT5_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified December 14, 2011. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Probable glycosyltransferase At5g20260
EC=2.4.-.-
Gene names
Ordered Locus Names:At5g20260
ORF Names:F5O24.150
OrganismArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length466 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

May be involved in cell wall biosynthesis.

Subcellular location

Golgi apparatus membrane; Single-pass type II membrane protein By similarity.

Sequence similarities

Belongs to the glycosyltransferase 47 family.

Ontologies

Keywords
   Biological processCell wall biogenesis/degradation
   Cellular componentGolgi apparatus
Membrane
   DomainSignal-anchor
Transmembrane
Transmembrane helix
   Molecular functionGlycosyltransferase
Transferase
   PTMGlycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processcellular cell wall organization

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentGolgi membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

integral to membrane

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functiontransferase activity, transferring glycosyl groups

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 466466Probable glycosyltransferase At5g20260
PRO_0000392296

Regions

Topological domain1 – 55Cytoplasmic Potential
Transmembrane6 – 2621Helical; Signal-anchor for type II membrane protein; Potential
Topological domain27 – 466440Lumenal Potential
Compositional bias31 – 7343Ser-rich

Amino acid modifications

Glycosylation671N-linked (GlcNAc...) Potential
Glycosylation2311N-linked (GlcNAc...) Potential
Glycosylation2691N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
Q3E9A4 [UniParc].

Last modified March 23, 2010. Version 3.
Checksum: F55238F1B3A5F4B1

FASTA46653,222
        10         20         30         40         50         60 
MEQSNFVNMK LSLVPTLLLL LVLLVFYQHH SSPNLNSNAL SSFVDATSLA PSPSPSLSME 

        70         80         90        100        110        120 
FSVASSNLST ISSPPENKGN KRNIIEEGLA KSRSAIREAV RLKKFVSDKE ETFVPRGAVY 

       130        140        150        160        170        180 
RNAFAFHQSH IEMEKKFKVW VYREGETPLV HMGPMNNIYS IEGQFMDEIE TGMSPFAANN 

       190        200        210        220        230        240 
PEEAHAFLLP VSVANIVHYL YRPLVTYSRE QLHKVFLDYV DVVAHKYPYW NRSLGADHFY 

       250        260        270        280        290        300 
VSCHDWAPDV SGSNPELMKN LIRVLCNANT SEGFMPQRDV SIPEINIPGG HLGPPRLSRS 

       310        320        330        340        350        360 
SGHDRPILAF FAGGSHGYIR RILLQHWKDK DEEVQVHEYL AKNKDYFKLM ATARFCLCPS 

       370        380        390        400        410        420 
GYEVASPRVV AAINLGCVPV IISDHYALPF SDVLDWTKFT IHVPSKKIPE IKTILKSISW 

       430        440        450        460 
RRYRVLQRRV LQVQRHFVIN RPSQPFDMLR MLLHSVWLRR LNLRLP

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana."
Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. expand/collapse author list , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.
Nature 408:823-826(2000) [PubMed: 11130714] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]"Identification of a xylogalacturonan xylosyltransferase involved in pectin biosynthesis in Arabidopsis."
Jensen J.K., Sorensen S.O., Harholt J., Geshi N., Sakuragi Y., Moller I., Zandleven J., Bernal A.J., Jensen N.B., Sorensen C., Pauly M., Beldman G., Willats W.G., Scheller H.V.
Plant Cell 20:1289-1302(2008) [PubMed: 18460606] [Abstract]
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AF296825 Genomic DNA. No translation available.
IPIIPI00519024.

3D structure databases

ProteinModelPortalQ3E9A4.
ModBaseSearch...

Protein family/group databases

CAZyGT47. Glycosyltransferase Family 47.

Proteomic databases

PRIDEQ3E9A4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GenomeReviewsGene locus AT5G20260 in contig BA000015_GR.
NMPDRfig|3702.1.peg.24237.

Organism-specific databases

TAIRAt5g20260.

Phylogenomic databases

eggNOGKOG1021.
GeneTreeEPGT00070000028243.
HOGENOMHBG744139.
InParanoidQ3E9A4.
PhylomeDBQ3E9A4.

Gene expression databases

GenevestigatorQ3E9A4.

Family and domain databases

InterProIPR004263. Exostosin.
[Graphical view]
PfamPF03016. Exostosin. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameGLYT5_ARATH
AccessionPrimary (citable) accession number: Q3E9A4
Entry history
Integrated into UniProtKB/Swiss-Prot: March 23, 2010
Last sequence update: March 23, 2010
Last modified: December 14, 2011
This is version 44 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

SIMILARITY comments

Index of protein domains and families

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