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Q3E811 (RRT15_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Regulator of rDNA transcription protein 15
Gene names
Name:RRT15
Ordered Locus Names:YLR162W-A
ORF Names:smORF483
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length62 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Involved in modulation of rDNA transcription. Ref.4

Sequence similarities

Belongs to the ART2/RRT15 family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 6262Regulator of rDNA transcription protein 15
PRO_0000262879

Sequences

Sequence LengthMass (Da)Tools
Q3E811 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: DAFDC0FDCB3A9E66

FASTA627,280
        10         20         30         40         50         60 
MVCIHTENQN QGDFYPFVLL EISVLHESPL GHLRYRLTDV PPQPNSPGEI YCFYINCIMN 


RR 

« Hide

References

« Hide 'large scale' references
[1]"The nucleotide sequence of Saccharomyces cerevisiae chromosome XII."
Johnston M., Hillier L.W., Riles L., Albermann K., Andre B., Ansorge W., Benes V., Brueckner M., Delius H., Dubois E., Duesterhoeft A., Entian K.-D., Floeth M., Goffeau A., Hebling U., Heumann K., Heuss-Neitzel D., Hilbert H. expand/collapse author list , Hilger F., Kleine K., Koetter P., Louis E.J., Messenguy F., Mewes H.-W., Miosga T., Moestl D., Mueller-Auer S., Nentwich U., Obermaier B., Piravandi E., Pohl T.M., Portetelle D., Purnelle B., Rechmann S., Rieger M., Rinke M., Rose M., Scharfe M., Scherens B., Scholler P., Schwager C., Schwarz S., Underwood A.P., Urrestarazu L.A., Vandenbol M., Verhasselt P., Vierendeels F., Voet M., Volckaert G., Voss H., Wambutt R., Wedler E., Wedler H., Zimmermann F.K., Zollner A., Hani J., Hoheisel J.D.
Nature 387:87-90(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[2]"The reference genome sequence of Saccharomyces cerevisiae: Then and now."
Engel S.R., Dietrich F.S., Fisk D.G., Binkley G., Balakrishnan R., Costanzo M.C., Dwight S.S., Hitz B.C., Karra K., Nash R.S., Weng S., Wong E.D., Lloyd P., Skrzypek M.S., Miyasato S.R., Simison M., Cherry J.M.
G3 (Bethesda) 4:389-398(2014) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
[3]"Systematic discovery of new genes in the Saccharomyces cerevisiae genome."
Kessler M.M., Zeng Q., Hogan S., Cook R., Morales A.J., Cottarel G.
Genome Res. 13:264-271(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
[4]"Genetic identification of factors that modulate ribosomal DNA transcription in Saccharomyces cerevisiae."
Hontz R.D., Niederer R.O., Johnson J.M., Smith J.S.
Genetics 182:105-119(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: FUNCTION.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U51921 Genomic DNA. No translation available.
BK006945 Genomic DNA. Translation: DAA09484.1.
RefSeqNP_878128.1. NM_001184566.1.

3D structure databases

ProteinModelPortalQ3E811.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiYLR162W-A; YLR162W-A; YLR162W-A.
GeneID1466416.
KEGGsce:YLR162W-A.

Organism-specific databases

CYGDYLR162w-a.
SGDS000028567. RRT15.

Phylogenomic databases

GeneTreeENSGT00530000064745.
OMAESATILH.
OrthoDBEOG7VDZ21.

Enzyme and pathway databases

BioCycYEAST:G3O-32580-MONOMER.

Gene expression databases

GenevestigatorQ3E811.

Family and domain databases

ProtoNetSearch...

Other

NextBio983475.

Entry information

Entry nameRRT15_YEAST
AccessionPrimary (citable) accession number: Q3E811
Secondary accession number(s): D6VYG8
Entry history
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: November 8, 2005
Last modified: May 14, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast chromosome XII

Yeast (Saccharomyces cerevisiae) chromosome XII: entries and gene names

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

SIMILARITY comments

Index of protein domains and families