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Q3E811

- RRT15_YEAST

UniProt

Q3E811 - RRT15_YEAST

Protein

Regulator of rDNA transcription protein 15

Gene

RRT15

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Involved in modulation of rDNA transcription.1 Publication

    GO - Biological processi

    1. regulation of transcription, DNA-templated Source: UniProtKB-KW
    2. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulation

    Enzyme and pathway databases

    BioCyciYEAST:G3O-32580-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Regulator of rDNA transcription protein 15
    Gene namesi
    Name:RRT15
    Ordered Locus Names:YLR162W-A
    ORF Names:smORF483
    OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
    Taxonomic identifieri559292 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
    ProteomesiUP000002311: Chromosome XII

    Organism-specific databases

    CYGDiYLR162w-a.
    SGDiS000028567. RRT15.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 6262Regulator of rDNA transcription protein 15PRO_0000262879Add
    BLAST

    Expressioni

    Gene expression databases

    GenevestigatoriQ3E811.

    Structurei

    3D structure databases

    ProteinModelPortaliQ3E811.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ART2/RRT15 family.Curated

    Phylogenomic databases

    GeneTreeiENSGT00530000064745.
    OMAiESATILH.
    OrthoDBiEOG7VDZ21.

    Sequencei

    Sequence statusi: Complete.

    Q3E811-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVCIHTENQN QGDFYPFVLL EISVLHESPL GHLRYRLTDV PPQPNSPGEI   50
    YCFYINCIMN RR 62
    Length:62
    Mass (Da):7,280
    Last modified:November 8, 2005 - v1
    Checksum:iDAFDC0FDCB3A9E66
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U51921 Genomic DNA. No translation available.
    BK006945 Genomic DNA. Translation: DAA09484.1.
    RefSeqiNP_878128.1. NM_001184566.1.

    Genome annotation databases

    EnsemblFungiiYLR162W-A; YLR162W-A; YLR162W-A.
    GeneIDi1466416.
    KEGGisce:YLR162W-A.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U51921 Genomic DNA. No translation available.
    BK006945 Genomic DNA. Translation: DAA09484.1 .
    RefSeqi NP_878128.1. NM_001184566.1.

    3D structure databases

    ProteinModelPortali Q3E811.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii YLR162W-A ; YLR162W-A ; YLR162W-A .
    GeneIDi 1466416.
    KEGGi sce:YLR162W-A.

    Organism-specific databases

    CYGDi YLR162w-a.
    SGDi S000028567. RRT15.

    Phylogenomic databases

    GeneTreei ENSGT00530000064745.
    OMAi ESATILH.
    OrthoDBi EOG7VDZ21.

    Enzyme and pathway databases

    BioCyci YEAST:G3O-32580-MONOMER.

    Miscellaneous databases

    NextBioi 983475.

    Gene expression databases

    Genevestigatori Q3E811.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XII."
      Johnston M., Hillier L.W., Riles L., Albermann K., Andre B., Ansorge W., Benes V., Brueckner M., Delius H., Dubois E., Duesterhoeft A., Entian K.-D., Floeth M., Goffeau A., Hebling U., Heumann K., Heuss-Neitzel D., Hilbert H.
      , Hilger F., Kleine K., Koetter P., Louis E.J., Messenguy F., Mewes H.-W., Miosga T., Moestl D., Mueller-Auer S., Nentwich U., Obermaier B., Piravandi E., Pohl T.M., Portetelle D., Purnelle B., Rechmann S., Rieger M., Rinke M., Rose M., Scharfe M., Scherens B., Scholler P., Schwager C., Schwarz S., Underwood A.P., Urrestarazu L.A., Vandenbol M., Verhasselt P., Vierendeels F., Voet M., Volckaert G., Voss H., Wambutt R., Wedler E., Wedler H., Zimmermann F.K., Zollner A., Hani J., Hoheisel J.D.
      Nature 387:87-90(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    2. Cited for: GENOME REANNOTATION.
      Strain: ATCC 204508 / S288c.
    3. "Systematic discovery of new genes in the Saccharomyces cerevisiae genome."
      Kessler M.M., Zeng Q., Hogan S., Cook R., Morales A.J., Cottarel G.
      Genome Res. 13:264-271(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
    4. "Genetic identification of factors that modulate ribosomal DNA transcription in Saccharomyces cerevisiae."
      Hontz R.D., Niederer R.O., Johnson J.M., Smith J.S.
      Genetics 182:105-119(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: FUNCTION.

    Entry informationi

    Entry nameiRRT15_YEAST
    AccessioniPrimary (citable) accession number: Q3E811
    Secondary accession number(s): D6VYG8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 28, 2006
    Last sequence update: November 8, 2005
    Last modified: October 1, 2014
    This is version 52 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families
    2. Yeast
      Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
    3. Yeast chromosome XII
      Yeast (Saccharomyces cerevisiae) chromosome XII: entries and gene names

    External Data

    Dasty 3