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Q3E7Y5 (YB111_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified December 14, 2011. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Uncharacterized helicase-like protein YBL111C
Gene names
Ordered Locus Names:YBL111C
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length667 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Miscellaneous

Present with 279 molecules/cell in log phase SD medium. Ref.3

Sequence similarities

Belongs to the helicase family. Yeast subtelomeric Y' repeat subfamily.

Contains 1 helicase ATP-binding domain.

Caution

Although strongly related to DNA helicases, it lacks the helicase C-terminal domain, suggesting that it has no helicase activity.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 667667Uncharacterized helicase-like protein YBL111C
PRO_0000248406

Regions

Domain375 – 552178Helicase ATP-binding
Nucleotide binding388 – 3958ATP Potential
Motif498 – 5014DEAH box

Sequences

Sequence LengthMass (Da)Tools
Q3E7Y5 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: C26A35A844F2841C

FASTA66776,246
        10         20         30         40         50         60 
MKVSDRRKFE KANFDEFESA LNNKNDLVHC PSITLFESIP TEVRSFYEDE KSGLIKVVKF 

        70         80         90        100        110        120 
RTGAMDRKRS FEKIVVSVMV GKNVQKFLTF VEDEPDFQGG PIPSKYLIPK KINLMVYTLF 

       130        140        150        160        170        180 
QVHTLKFNRK DYDTLSLFYL NRGYYNELSF RVLERCYEIA SARPNDSSTM RTFTDFVSGT 

       190        200        210        220        230        240 
PIVRSLQKST IRKYGYNLAP YMFLLLHVDE LSIFSAYQAS LPGEKKVDTE RLKRDLCPRK 

       250        260        270        280        290        300 
PTEIKYFSQI CNDMMNKKDR LGDVLATAQR IRRRYNKNGS SEPRLKTLDG LTSERWIQWL 

       310        320        330        340        350        360 
GLESDYHCSF SSTRNAEDVV AGEAASSDHD QKISRVTRKR PREPKSTNDI LVAGRKLFGS 

       370        380        390        400        410        420 
SFEFRDLHQL RLCHEIYMAD TPSVAVQAPP GYGKTELFHL PLIALASKGD VKYVSFLFVP 

       430        440        450        460        470        480 
YTVLLANCMI RLGRRGCLNV APVRNFIEEG CDGVTDLYVG IYDDLASTNF TDRIAAWENI 

       490        500        510        520        530        540 
VECTFRTNNV KLGYLIVDEF HNFETEVYRQ SQFGGITNLD FDAFEKAIFL SGTAPEAVAD 

       550        560        570        580        590        600 
AALQRIGLTG LAKKSMDINE LKRSEDLSRG LSSYPTRMFN LIKEKSEVPL GHVHKIWKKV 

       610        620        630        640        650        660 
ESQPEEALKL LLALFEIEPE SKAIVVASTT NEVEELACSW RKYFRVVWIH GKLGCCRKGV 


SHKGVCH 

« Hide

References

« Hide 'large scale' references
[1]"Complete DNA sequence of yeast chromosome II."
Feldmann H., Aigle M., Aljinovic G., Andre B., Baclet M.C., Barthe C., Baur A., Becam A.-M., Biteau N., Boles E., Brandt T., Brendel M., Brueckner M., Bussereau F., Christiansen C., Contreras R., Crouzet M., Cziepluch C. expand/collapse author list , Demolis N., Delaveau T., Doignon F., Domdey H., Duesterhus S., Dubois E., Dujon B., El Bakkoury M., Entian K.-D., Feuermann M., Fiers W., Fobo G.M., Fritz C., Gassenhuber J., Glansdorff N., Goffeau A., Grivell L.A., de Haan M., Hein C., Herbert C.J., Hollenberg C.P., Holmstroem K., Jacq C., Jacquet M., Jauniaux J.-C., Jonniaux J.-L., Kallesoee T., Kiesau P., Kirchrath L., Koetter P., Korol S., Liebl S., Logghe M., Lohan A.J.E., Louis E.J., Li Z.Y., Maat M.J., Mallet L., Mannhaupt G., Messenguy F., Miosga T., Molemans F., Mueller S., Nasr F., Obermaier B., Perea J., Pierard A., Piravandi E., Pohl F.M., Pohl T.M., Potier S., Proft M., Purnelle B., Ramezani Rad M., Rieger M., Rose M., Schaaff-Gerstenschlaeger I., Scherens B., Schwarzlose C., Skala J., Slonimski P.P., Smits P.H.M., Souciet J.-L., Steensma H.Y., Stucka R., Urrestarazu L.A., van der Aart Q.J.M., Van Dyck L., Vassarotti A., Vetter I., Vierendeels F., Vissers S., Wagner G., de Wergifosse P., Wolfe K.H., Zagulski M., Zimmermann F.K., Mewes H.-W., Kleine K.
EMBO J. 13:5795-5809(1994) [PubMed: 7813418] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S288c / YPH1.
[2]Saccharomyces Genome Database
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
[3]"Global analysis of protein expression in yeast."
Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.
Nature 425:737-741(2003) [PubMed: 14562106] [Abstract]
Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Y08934 Genomic DNA. No translation available.
BK006936 Genomic DNA. Translation: DAA07014.1.
RefSeqNP_009439.1. NM_001180052.1.

3D structure databases

ProteinModelPortalQ3E7Y5.
ModBaseSearch...

Protein-protein interaction databases

IntActQ3E7Y5. 8 interactions.
MINTMINT-2492850.
STRINGQ3E7Y5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiYBL111C; YBL111C; YBL111C.
GeneID852161.
KEGGsce:YBL111C.

Organism-specific databases

CYGDYBL111c.
SGDS000002151. YBL111C.

Phylogenomic databases

eggNOGCOG0513.
GeneTreeEFGT00070000008730.
HOGENOMHBG204195.
OrthoDBEOG4V9Z0T.

Gene expression databases

GenevestigatorQ3E7Y5.

Family and domain databases

InterProIPR014001. DEAD-like_helicase.
IPR011545. DNA/RNA_helicase_DEAD/DEAH_N.
[Graphical view]
PfamPF00270. DEAD. 1 hit.
[Graphical view]
SMARTSM00487. DEXDc. 1 hit.
[Graphical view]
PROSITEPS51192. HELICASE_ATP_BIND_1. False negative.
[Graphical view]
ProtoNetSearch...

Other

NextBio970600.

Entry information

Entry nameYB111_YEAST
AccessionPrimary (citable) accession number: Q3E7Y5
Secondary accession number(s): D6VPP4
Entry history
Integrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: November 8, 2005
Last modified: December 14, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

Yeast chromosome II

Yeast (Saccharomyces cerevisiae) chromosome II: entries and gene names

SIMILARITY comments

Index of protein domains and families