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Protein

Putative uncharacterized helicase-like protein YBL112C

Gene

YBL112C

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Functioni

Enzyme and pathway databases

BioCyciYEAST:G3O-29224-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized helicase-like protein YBL112C
Gene namesi
Ordered Locus Names:YBL112C
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311 Componenti: Chromosome II

Organism-specific databases

CYGDiYBL112c.
YHR218w-a.
EuPathDBiFungiDB:YBL112C.
SGDiS000002152. YBL112C.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 105105Putative uncharacterized helicase-like protein YBL112CPRO_0000248407Add
BLAST

Proteomic databases

PaxDbiQ3E7Y4.

Expressioni

Inductioni

Upon SUB2 overexpression.1 Publication

Gene expression databases

GenevestigatoriQ3E7Y4.

Interactioni

Protein-protein interaction databases

BioGridi32592. 2 interactions.
DIPiDIP-2966N.
STRINGi4932.YBL112C.

Structurei

3D structure databases

ProteinModelPortaliQ3E7Y4.
SMRiQ3E7Y4. Positions 1-55.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini2 – 4443Helicase C-terminalAdd
BLAST

Sequence similaritiesi

Contains 1 helicase C-terminal domain.Curated

Phylogenomic databases

eggNOGiCOG0513.
GeneTreeiENSGT00440000033744.
InParanoidiQ3E7Y4.
OrthoDBiEOG7CNZS9.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00271. Helicase_C. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3E7Y4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQVLIGTKLV TEGIDIKQLM MVIMLDNRLN IIELIQGVGR LRDGGLCYLL
60 70 80 90 100
SRKNSWAARN RKGELPPIKE GCITEQVREF YGLESKKGKK GPACWMLWLQ

DRPVC
Length:105
Mass (Da):11,974
Last modified:November 8, 2005 - v1
Checksum:i98A2C6CB2F7F3CEB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y08934 Genomic DNA. No translation available.
BK006936 Genomic DNA. Translation: DAA07013.1.
RefSeqiNP_009438.1. NM_001180053.1.

Genome annotation databases

EnsemblFungiiYBL112C; YBL112C; YBL112C.
YHR218W-A; YHR218W-A; YHR218W-A.
GeneIDi852160.
KEGGisce:YBL112C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y08934 Genomic DNA. No translation available.
BK006936 Genomic DNA. Translation: DAA07013.1.
RefSeqiNP_009438.1. NM_001180053.1.

3D structure databases

ProteinModelPortaliQ3E7Y4.
SMRiQ3E7Y4. Positions 1-55.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi32592. 2 interactions.
DIPiDIP-2966N.
STRINGi4932.YBL112C.

Proteomic databases

PaxDbiQ3E7Y4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYBL112C; YBL112C; YBL112C.
YHR218W-A; YHR218W-A; YHR218W-A.
GeneIDi852160.
KEGGisce:YBL112C.

Organism-specific databases

CYGDiYBL112c.
YHR218w-a.
EuPathDBiFungiDB:YBL112C.
SGDiS000002152. YBL112C.

Phylogenomic databases

eggNOGiCOG0513.
GeneTreeiENSGT00440000033744.
InParanoidiQ3E7Y4.
OrthoDBiEOG7CNZS9.

Enzyme and pathway databases

BioCyciYEAST:G3O-29224-MONOMER.

Miscellaneous databases

NextBioi970597.

Gene expression databases

GenevestigatoriQ3E7Y4.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00271. Helicase_C. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete DNA sequence of yeast chromosome II."
    Feldmann H., Aigle M., Aljinovic G., Andre B., Baclet M.C., Barthe C., Baur A., Becam A.-M., Biteau N., Boles E., Brandt T., Brendel M., Brueckner M., Bussereau F., Christiansen C., Contreras R., Crouzet M., Cziepluch C.
    , Demolis N., Delaveau T., Doignon F., Domdey H., Duesterhus S., Dubois E., Dujon B., El Bakkoury M., Entian K.-D., Feuermann M., Fiers W., Fobo G.M., Fritz C., Gassenhuber J., Glansdorff N., Goffeau A., Grivell L.A., de Haan M., Hein C., Herbert C.J., Hollenberg C.P., Holmstroem K., Jacq C., Jacquet M., Jauniaux J.-C., Jonniaux J.-L., Kallesoee T., Kiesau P., Kirchrath L., Koetter P., Korol S., Liebl S., Logghe M., Lohan A.J.E., Louis E.J., Li Z.Y., Maat M.J., Mallet L., Mannhaupt G., Messenguy F., Miosga T., Molemans F., Mueller S., Nasr F., Obermaier B., Perea J., Pierard A., Piravandi E., Pohl F.M., Pohl T.M., Potier S., Proft M., Purnelle B., Ramezani Rad M., Rieger M., Rose M., Schaaff-Gerstenschlaeger I., Scherens B., Schwarzlose C., Skala J., Slonimski P.P., Smits P.H.M., Souciet J.-L., Steensma H.Y., Stucka R., Urrestarazu L.A., van der Aart Q.J.M., Van Dyck L., Vassarotti A., Vetter I., Vierendeels F., Vissers S., Wagner G., de Wergifosse P., Wolfe K.H., Zagulski M., Zimmermann F.K., Mewes H.-W., Kleine K.
    EMBO J. 13:5795-5809(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  3. "The Saccharomyces cerevisiae Sub2 protein suppresses heterochromatic silencing at telomeres and subtelomeric genes."
    Lahue E., Heckathorn J., Meyer Z., Smith J., Wolfe C.
    Yeast 22:537-551(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: INDUCTION.

Entry informationi

Entry nameiYB112_YEAST
AccessioniPrimary (citable) accession number: Q3E7Y4
Secondary accession number(s): D6VPP3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: November 8, 2005
Last modified: April 29, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Caution

Although strongly related to DNA helicases, it lacks the helicase ATP-binding domains, suggesting that it has no helicase activity.Curated
Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome II
    Yeast (Saccharomyces cerevisiae) chromosome II: entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.