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Q3E7Y4 (YB112_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative uncharacterized helicase-like protein YBL112C
Gene names
Ordered Locus Names:YBL112C
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length105 AA.
Sequence statusComplete.
Protein existenceUncertain

General annotation (Comments)

Induction

Upon SUB2 overexpression. Ref.3

Sequence similarities

Belongs to the helicase family. Yeast subtelomeric Y' repeat subfamily.

Contains 1 helicase C-terminal domain.

Caution

Although strongly related to DNA helicases, it lacks the helicase ATP-binding domains, suggesting that it has no helicase activity.

Could be the product of a pseudogene.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 105105Putative uncharacterized helicase-like protein YBL112C
PRO_0000248407

Regions

Domain2 – 4443Helicase C-terminal

Sequences

Sequence LengthMass (Da)Tools
Q3E7Y4 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: 98A2C6CB2F7F3CEB

FASTA10511,974
        10         20         30         40         50         60 
MQVLIGTKLV TEGIDIKQLM MVIMLDNRLN IIELIQGVGR LRDGGLCYLL SRKNSWAARN 

        70         80         90        100 
RKGELPPIKE GCITEQVREF YGLESKKGKK GPACWMLWLQ DRPVC 

« Hide

References

« Hide 'large scale' references
[1]"Complete DNA sequence of yeast chromosome II."
Feldmann H., Aigle M., Aljinovic G., Andre B., Baclet M.C., Barthe C., Baur A., Becam A.-M., Biteau N., Boles E., Brandt T., Brendel M., Brueckner M., Bussereau F., Christiansen C., Contreras R., Crouzet M., Cziepluch C. expand/collapse author list , Demolis N., Delaveau T., Doignon F., Domdey H., Duesterhus S., Dubois E., Dujon B., El Bakkoury M., Entian K.-D., Feuermann M., Fiers W., Fobo G.M., Fritz C., Gassenhuber J., Glansdorff N., Goffeau A., Grivell L.A., de Haan M., Hein C., Herbert C.J., Hollenberg C.P., Holmstroem K., Jacq C., Jacquet M., Jauniaux J.-C., Jonniaux J.-L., Kallesoee T., Kiesau P., Kirchrath L., Koetter P., Korol S., Liebl S., Logghe M., Lohan A.J.E., Louis E.J., Li Z.Y., Maat M.J., Mallet L., Mannhaupt G., Messenguy F., Miosga T., Molemans F., Mueller S., Nasr F., Obermaier B., Perea J., Pierard A., Piravandi E., Pohl F.M., Pohl T.M., Potier S., Proft M., Purnelle B., Ramezani Rad M., Rieger M., Rose M., Schaaff-Gerstenschlaeger I., Scherens B., Schwarzlose C., Skala J., Slonimski P.P., Smits P.H.M., Souciet J.-L., Steensma H.Y., Stucka R., Urrestarazu L.A., van der Aart Q.J.M., Van Dyck L., Vassarotti A., Vetter I., Vierendeels F., Vissers S., Wagner G., de Wergifosse P., Wolfe K.H., Zagulski M., Zimmermann F.K., Mewes H.-W., Kleine K.
EMBO J. 13:5795-5809(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[2]"The reference genome sequence of Saccharomyces cerevisiae: Then and now."
Engel S.R., Dietrich F.S., Fisk D.G., Binkley G., Balakrishnan R., Costanzo M.C., Dwight S.S., Hitz B.C., Karra K., Nash R.S., Weng S., Wong E.D., Lloyd P., Skrzypek M.S., Miyasato S.R., Simison M., Cherry J.M.
G3 (Bethesda) 4:389-398(2014) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
[3]"The Saccharomyces cerevisiae Sub2 protein suppresses heterochromatic silencing at telomeres and subtelomeric genes."
Lahue E., Heckathorn J., Meyer Z., Smith J., Wolfe C.
Yeast 22:537-551(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: INDUCTION.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Y08934 Genomic DNA. No translation available.
BK006936 Genomic DNA. Translation: DAA07013.1.
RefSeqNP_009438.1. NM_001180053.1.

3D structure databases

ProteinModelPortalQ3E7Y4.
SMRQ3E7Y4. Positions 1-56.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid32592. 2 interactions.
DIPDIP-2966N.
STRING4932.YBL112C.

Proteomic databases

PaxDbQ3E7Y4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiYBL112C; YBL112C; YBL112C.
YHR218W-A; YHR218W-A; YHR218W-A.
GeneID852160.
KEGGsce:YBL112C.

Organism-specific databases

CYGDYBL112c.
YHR218w-a.
SGDS000002152. YBL112C.

Phylogenomic databases

eggNOGCOG0513.
GeneTreeENSGT00440000033744.
OMAIENKFIP.
OrthoDBEOG7CNZS9.

Enzyme and pathway databases

BioCycYEAST:G3O-29224-MONOMER.

Gene expression databases

GenevestigatorQ3E7Y4.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
InterProIPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamPF00271. Helicase_C. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 1 hit.
ProtoNetSearch...

Other

NextBio970597.

Entry information

Entry nameYB112_YEAST
AccessionPrimary (citable) accession number: Q3E7Y4
Secondary accession number(s): D6VPP3
Entry history
Integrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: November 8, 2005
Last modified: June 11, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast chromosome II

Yeast (Saccharomyces cerevisiae) chromosome II: entries and gene names

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

SIMILARITY comments

Index of protein domains and families