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Protein

Putative uncharacterized helicase-like protein YBL112C

Gene

YBL112C

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Functioni

Enzyme and pathway databases

BioCyciYEAST:G3O-29224-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized helicase-like protein YBL112C
Gene namesi
Ordered Locus Names:YBL112C
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:YBL112C.
SGDiS000002152. YBL112C.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002484071 – 105Putative uncharacterized helicase-like protein YBL112CAdd BLAST105

Proteomic databases

PRIDEiQ3E7Y4.

Expressioni

Inductioni

Upon SUB2 overexpression.1 Publication

Interactioni

Protein-protein interaction databases

BioGridi32592. 2 interactors.
DIPiDIP-2966N.

Structurei

3D structure databases

ProteinModelPortaliQ3E7Y4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 44Helicase C-terminalAdd BLAST43

Sequence similaritiesi

Contains 1 helicase C-terminal domain.Curated

Phylogenomic databases

GeneTreeiENSGT00440000033744.
InParanoidiQ3E7Y4.
OrthoDBiEOG092C1JVR.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00271. Helicase_C. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3E7Y4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQVLIGTKLV TEGIDIKQLM MVIMLDNRLN IIELIQGVGR LRDGGLCYLL
60 70 80 90 100
SRKNSWAARN RKGELPPIKE GCITEQVREF YGLESKKGKK GPACWMLWLQ

DRPVC
Length:105
Mass (Da):11,974
Last modified:November 8, 2005 - v1
Checksum:i98A2C6CB2F7F3CEB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y08934 Genomic DNA. No translation available.
BK006936 Genomic DNA. Translation: DAA07013.1.
RefSeqiNP_009438.1. NM_001180053.1.

Genome annotation databases

EnsemblFungiiYBL112C; YBL112C; YBL112C.
YHR218W-A; YHR218W-A; YHR218W-A.
GeneIDi852160.
KEGGisce:YBL112C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y08934 Genomic DNA. No translation available.
BK006936 Genomic DNA. Translation: DAA07013.1.
RefSeqiNP_009438.1. NM_001180053.1.

3D structure databases

ProteinModelPortaliQ3E7Y4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi32592. 2 interactors.
DIPiDIP-2966N.

Proteomic databases

PRIDEiQ3E7Y4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYBL112C; YBL112C; YBL112C.
YHR218W-A; YHR218W-A; YHR218W-A.
GeneIDi852160.
KEGGisce:YBL112C.

Organism-specific databases

EuPathDBiFungiDB:YBL112C.
SGDiS000002152. YBL112C.

Phylogenomic databases

GeneTreeiENSGT00440000033744.
InParanoidiQ3E7Y4.
OrthoDBiEOG092C1JVR.

Enzyme and pathway databases

BioCyciYEAST:G3O-29224-MONOMER.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00271. Helicase_C. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYB112_YEAST
AccessioniPrimary (citable) accession number: Q3E7Y4
Secondary accession number(s): D6VPP3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: November 8, 2005
Last modified: November 2, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Caution

Although strongly related to DNA helicases, it lacks the helicase ATP-binding domains, suggesting that it has no helicase activity.Curated
Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome II
    Yeast (Saccharomyces cerevisiae) chromosome II: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.