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Reviewed, UniProtKB/Swiss-Prot Q3E7A4 (YB059_YEAST)

Last modified November 24, 2009. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Coiled-coil-helix-coiled-coil-helix domain-containing protein YBL059C-A
Gene names
Ordered Locus Names: YBL059C-A
OrganismSaccharomyces cerevisiae (Baker's yeast) [Complete proteome]
Taxonomic identifier4932 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length109 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

General annotation (Comments)

Subcellular location

Cytoplasm. Nucleus.

Miscellaneous

Present with 279 molecules/cell in log phase SD medium. Ref.4

Sequence similarities

Contains 1 CHCH domain.

Ontologies

Keywords
   Cellular componentCytoplasm
Nucleus
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processmitochondrial respiratory chain complex assembly

Inferred from mutant phenotype. Source: SGD

   Cellular componentmitochondrial intermembrane space

Inferred from direct assay. Source: SGD

nucleus Ref.3

Inferred from direct assay. Source: SGD

   Molecular functionprotein binding

Inferred from physical interaction. Source: IntAct

Complete GO annotation...

Binary interactions

With

Entry

#Exp.

IntAct

Notes

SLU7Q027751EBI-2088942,EBI-17379

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 109109Coiled-coil-helix-coiled-coil-helix domain-containing protein YBL059C-A
PRO_0000248414

Regions

Domain6 – 4944CHCH

Sequences

Sequence LengthMass (Da)Tools
Q3E7A4-1 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: 5D740EFEC60E5E5F

FASTA10912,947
        10         20         30         40         50         60 
MHPQLEAERF HSCLDFINAL DKCHQKEYYK RIFGLCNNEK DALNKCLKEA SLNNKKRAVI 

        70         80         90        100 
ESRIKRADVE KRWKKIEEEE YGEDAILKTI LDRQYAKKKQ ESDNDANSK 

« Hide

References

« Hide 'large scale' references
[1]"Sequencing and functional analysis of a 32,560 bp segment on the left arm of yeast chromosome II. Identification of 26 open reading frames, including the KIP1 and SEC17 genes."
Scherens B., el Bakkoury M., Vierendeels F., Dubois E., Messenguy F.
Yeast 9:1355-1371(1993) [PubMed: 8154187] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[2]"Complete DNA sequence of yeast chromosome II."
Feldmann H., Aigle M., Aljinovic G., Andre B., Baclet M.C., Barthe C., Baur A., Becam A.-M., Biteau N., Boles E., Brandt T., Brendel M., Brueckner M., Bussereau F., Christiansen C., Contreras R., Crouzet M., Cziepluch C. expand/collapse author list , Demolis N., Delaveau T., Doignon F., Domdey H., Duesterhus S., Dubois E., Dujon B., El Bakkoury M., Entian K.-D., Feuermann M., Fiers W., Fobo G.M., Fritz C., Gassenhuber J., Glansdorff N., Goffeau A., Grivell L.A., de Haan M., Hein C., Herbert C.J., Hollenberg C.P., Holmstroem K., Jacq C., Jacquet M., Jauniaux J.-C., Jonniaux J.-L., Kallesoee T., Kiesau P., Kirchrath L., Koetter P., Korol S., Liebl S., Logghe M., Lohan A.J.E., Louis E.J., Li Z.Y., Maat M.J., Mallet L., Mannhaupt G., Messenguy F., Miosga T., Molemans F., Mueller S., Nasr F., Obermaier B., Perea J., Pierard A., Piravandi E., Pohl F.M., Pohl T.M., Potier S., Proft M., Purnelle B., Ramezani Rad M., Rieger M., Rose M., Schaaff-Gerstenschlaeger I., Scherens B., Schwarzlose C., Skala J., Slonimski P.P., Smits P.H.M., Souciet J.-L., Steensma H.Y., Stucka R., Urrestarazu L.A., van der Aart Q.J.M., Van Dyck L., Vassarotti A., Vetter I., Vierendeels F., Vissers S., Wagner G., de Wergifosse P., Wolfe K.H., Zagulski M., Zimmermann F.K., Mewes H.-W., Kleine K.
EMBO J. 13:5795-5809(1994) [PubMed: 7813418] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S288c / YPH1.
[3]"Global analysis of protein localization in budding yeast."
Huh W.-K., Falvo J.V., Gerke L.C., Carroll A.S., Howson R.W., Weissman J.S., O'Shea E.K.
Nature 425:686-691(2003) [PubMed: 14562095] [Abstract]
Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
[4]"Global analysis of protein expression in yeast."
Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.
Nature 425:737-741(2003) [PubMed: 14562106] [Abstract]
Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
+Additional computationally mapped references.

Cross-references

Sequence databases

Z23261 Genomic DNA. No translation available.
Z35821 Genomic DNA. No translation available.
RefSeqNP_031358.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

IntActQ3E7A4. 1 interaction.

Proteomic databases

PeptideAtlasQ3E7A4.

Genome annotation databases

EnsemblYBL059C-A; YBL059C-A; YBL059C-A; Saccharomyces cerevisiae. [Genome view]
GeneID852220.
KEGGsce:YBL059C-A.
NMPDRfig|4932.3.peg.183.

Organism-specific databases

CYGDYBL059c-a.
SGDS000007488. YBL059C-A.

Phylogenomic databases

HOGENOMQ3E7A4.
OMAALEECHR
OrthoDBEOG9BVT9S

Gene expression databases

ArrayExpressQ3E7A4.
GenevestigatorQ3E7A4.

Family and domain databases

InterProIPR013892. Cyt_c_biogenesis_Cmc1-like.
[Graphical view]
PfamPF08583. Cmc1. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio970736.

Entry information

Entry nameYB059_YEAST
AccessionPrimary (citable) accession number: Q3E7A4
Entry history
Integrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: November 8, 2005
Last modified: November 24, 2009
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectFPAP (Fungal Proteome Annotation Project)

Relevant documents

SIMILARITY comments

Index of protein domains and families

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

Yeast chromosome II

Yeast (Saccharomyces cerevisiae) chromosome II: entries and gene names

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents