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Protein

Glycogen synthase

Gene

glgA

Organism
Xanthomonas campestris pv. vesicatoria (strain 85-10)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathway: glycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei47 – 471ADP-glucoseUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciXCAM316273:GJF8-459-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:XCV0451
OrganismiXanthomonas campestris pv. vesicatoria (strain 85-10)
Taxonomic identifieri316273 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
ProteomesiUP000007069 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 509509Glycogen synthasePRO_0000230273Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi316273.XCV0451.

Structurei

3D structure databases

ProteinModelPortaliQ3BYI1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3BYI1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLPTLKKSGR PRDARGRFIR HHERLPVSLA DTRGALFVAS EMADFIKAGG
60 70 80 90 100
LGDVAAALPR ALRHRYDVRV LIPGYRAVLE RAGKVEIVGR VLAHAALPAC
110 120 130 140 150
DIGRIVQSDG LPIYILLSKE LFERDGSPYV STSGSEFEDN AIRFATLSHA
160 170 180 190 200
AAQIAAGHAG LGWKPRLLHL NDWPCALAAG YVRWSGGTTP CLLTIHNLAY
210 220 230 240 250
QGLVPYSMAA ALGIPAERVA ELEFYGQMSF LRGGIVNADH VNTVSVSYAK
260 270 280 290 300
QITGPAQGCG LDRLLAGRAA KGALTGIVNG IDASWDPRTD EYLDSHFSVN
310 320 330 340 350
QWQGRQANAA QVRKAFGLRE STGPLFAVVS RLVHQKGLDL ICEVAPQIVA
360 370 380 390 400
AGGQIAVIGG GEPEIERQVA ELTRRYPGQV GAFIGFEEGL ARRMFAGADF
410 420 430 440 450
LLMPSRFEPC GLSQMYAQRF GCLPIAHATG GLIDTVDDGV TGFLFQHASV
460 470 480 490 500
EALRRCLERA FRTFRLPSLL SAMRRAAMLR PSGWDVAGKK YLSLYEHTAA

TAPALATVS
Length:509
Mass (Da):54,851
Last modified:April 4, 2006 - v2
Checksum:i8FA2CB796BAA94B8
GO

Sequence cautioni

The sequence CAJ22082.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM039952 Genomic DNA. Translation: CAJ22082.1. Different initiation.
RefSeqiWP_011346121.1. NC_007508.1.
YP_362182.1. NC_007508.1.

Genome annotation databases

EnsemblBacteriaiCAJ22082; CAJ22082; XCV0451.
KEGGixcv:XCV0451.
PATRICi24090250. VBIXanCam71633_0639.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM039952 Genomic DNA. Translation: CAJ22082.1. Different initiation.
RefSeqiWP_011346121.1. NC_007508.1.
YP_362182.1. NC_007508.1.

3D structure databases

ProteinModelPortaliQ3BYI1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi316273.XCV0451.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ22082; CAJ22082; XCV0451.
KEGGixcv:XCV0451.
PATRICi24090250. VBIXanCam71633_0639.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciXCAM316273:GJF8-459-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 85-10.

Entry informationi

Entry nameiGLGA_XANC5
AccessioniPrimary (citable) accession number: Q3BYI1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: April 4, 2006
Last modified: June 24, 2015
This is version 55 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.