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Q3BYI1 (GLGA_XANC5) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:XCV0451
OrganismXanthomonas campestris pv. vesicatoria (strain 85-10) [Complete proteome] [HAMAP]
Taxonomic identifier316273 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas

Protein attributes

Sequence length509 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Sequence caution

The sequence CAJ22082.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 509509Glycogen synthase HAMAP-Rule MF_00484
PRO_0000230273

Sites

Binding site471ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q3BYI1 [UniParc].

Last modified April 4, 2006. Version 2.
Checksum: 8FA2CB796BAA94B8

FASTA50954,851
        10         20         30         40         50         60 
MLPTLKKSGR PRDARGRFIR HHERLPVSLA DTRGALFVAS EMADFIKAGG LGDVAAALPR 

        70         80         90        100        110        120 
ALRHRYDVRV LIPGYRAVLE RAGKVEIVGR VLAHAALPAC DIGRIVQSDG LPIYILLSKE 

       130        140        150        160        170        180 
LFERDGSPYV STSGSEFEDN AIRFATLSHA AAQIAAGHAG LGWKPRLLHL NDWPCALAAG 

       190        200        210        220        230        240 
YVRWSGGTTP CLLTIHNLAY QGLVPYSMAA ALGIPAERVA ELEFYGQMSF LRGGIVNADH 

       250        260        270        280        290        300 
VNTVSVSYAK QITGPAQGCG LDRLLAGRAA KGALTGIVNG IDASWDPRTD EYLDSHFSVN 

       310        320        330        340        350        360 
QWQGRQANAA QVRKAFGLRE STGPLFAVVS RLVHQKGLDL ICEVAPQIVA AGGQIAVIGG 

       370        380        390        400        410        420 
GEPEIERQVA ELTRRYPGQV GAFIGFEEGL ARRMFAGADF LLMPSRFEPC GLSQMYAQRF 

       430        440        450        460        470        480 
GCLPIAHATG GLIDTVDDGV TGFLFQHASV EALRRCLERA FRTFRLPSLL SAMRRAAMLR 

       490        500 
PSGWDVAGKK YLSLYEHTAA TAPALATVS 

« Hide

References

[1]"Insights into genome plasticity and pathogenicity of the plant pathogenic Bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence."
Thieme F., Koebnik R., Bekel T., Berger C., Boch J., Buettner D., Caldana C., Gaigalat L., Goesmann A., Kay S., Kirchner O., Lanz C., Linke B., McHardy A.C., Meyer F., Mittenhuber G., Nies D.H., Niesbach-Kloesgen U. expand/collapse author list , Patschkowski T., Rueckert C., Rupp O., Schneiker S., Schuster S.C., Vorhoelter F.J., Weber E., Puehler A., Bonas U., Bartels D., Kaiser O.
J. Bacteriol. 187:7254-7266(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 85-10.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM039952 Genomic DNA. Translation: CAJ22082.1. Different initiation.
RefSeqYP_362182.1. NC_007508.1.

3D structure databases

ProteinModelPortalQ3BYI1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING316273.XCV0451.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAJ22082; CAJ22082; XCV0451.
GeneID3732481.
KEGGxcv:XCV0451.
PATRIC24090250. VBIXanCam71633_0639.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294941.
KOK00703.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycXCAM316273:GJF8-459-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_XANC5
AccessionPrimary (citable) accession number: Q3BYI1
Entry history
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: April 4, 2006
Last modified: May 14, 2014
This is version 50 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways