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Protein

Probable lipid kinase YegS-like

Gene

XCV0504

Organism
Xanthomonas campestris pv. vesicatoria (strain 85-10)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Probably phosphorylates lipids; the in vivo substrate is unknown.UniRule annotation

Cofactori

Mg2+UniRule annotation, Ca2+UniRule annotationNote: Binds 1 Mg2+ ion per subunit. Ca2+ may be able to substitute.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei39ATPUniRule annotation1
Binding sitei96ATPUniRule annotation1
Metal bindingi219Magnesium; via carbonyl oxygenUniRule annotation1
Metal bindingi222MagnesiumUniRule annotation1
Metal bindingi224Magnesium; via carbonyl oxygenUniRule annotation1
Active sitei280Proton acceptorUniRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi65 – 71ATPUniRule annotation7

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionKinase, Transferase
Biological processLipid biosynthesis, Lipid metabolism, Phospholipid biosynthesis, Phospholipid metabolism
LigandATP-binding, Magnesium, Metal-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciXCAM316273:GJF8-505-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Probable lipid kinase YegS-likeUniRule annotation (EC:2.7.1.-UniRule annotation)
Gene namesi
Ordered Locus Names:XCV0504
OrganismiXanthomonas campestris pv. vesicatoria (strain 85-10)
Taxonomic identifieri316273 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
Proteomesi
  • UP000007069 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002921671 – 309Probable lipid kinase YegS-likeAdd BLAST309

Proteomic databases

PRIDEiQ3BYC8

Interactioni

Protein-protein interaction databases

STRINGi316273.XCV0504

Structurei

3D structure databases

ProteinModelPortaliQ3BYC8
SMRiQ3BYC8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 134DAGKcUniRule annotationAdd BLAST134

Sequence similaritiesi

Belongs to the diacylglycerol/lipid kinase family. YegS lipid kinase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107TE5 Bacteria
COG1597 LUCA
HOGENOMiHOG000261396
OMAiEHINDPH
OrthoDBiPOG091H02HT

Family and domain databases

Gene3Di3.40.50.10330, 2 hits
HAMAPiMF_01377 YegS, 1 hit
InterProiView protein in InterPro
IPR017438 ATP-NAD_kinase_N
IPR005218 Diacylglycerol/lipid_kinase
IPR001206 Diacylglycerol_kinase_cat_dom
IPR022433 Lip_kinase_YegS
IPR016064 NAD/diacylglycerol_kinase_sf
PfamiView protein in Pfam
PF00781 DAGK_cat, 1 hit
SMARTiView protein in SMART
SM00046 DAGKc, 1 hit
SUPFAMiSSF111331 SSF111331, 1 hit
TIGRFAMsiTIGR03702 lip_kinase_YegS, 1 hit
TIGR00147 TIGR00147, 1 hit
PROSITEiView protein in PROSITE
PS50146 DAGK, 1 hit

Sequencei

Sequence statusi: Complete.

Q3BYC8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPSHWRVIL NGKSTDNMDL REAVGTLRKR GIQLDVRVTW EDGDAERYVG
60 70 80 90 100
EAVADGVHTV VAAGGDGTLS EVAAALAHHE GDAASLPSLG LVPLGTANDF
110 120 130 140 150
ATAANLPIAP LEALTLIAER VAQPVDLLRI DADHGPHWCA NVASGGFGTQ
160 170 180 190 200
VTVETDEGLK KMLGGLAYLI TGMSRLGRID PISARFSGPE FSWEGEFIAL
210 220 230 240 250
GLGNGRQAGG GQALCPEALI DDGLLDVTIV PDLDGEVAAT LGTLVIGGKQ
260 270 280 290 300
AALERVAVRA RVPWLEIVSQ QPLTLNLDGE PETSRHFRIE CVPARLRMHL

PGECPLLGG
Length:309
Mass (Da):32,458
Last modified:November 22, 2005 - v1
Checksum:iFFC416DA07E319DB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM039952 Genomic DNA Translation: CAJ22135.1
RefSeqiWP_011346165.1, NZ_CP017190.1

Genome annotation databases

EnsemblBacteriaiCAJ22135; CAJ22135; XCV0504
KEGGixcv:XCV0504

Similar proteinsi

Entry informationi

Entry nameiYEGS_XANC5
AccessioniPrimary (citable) accession number: Q3BYC8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 26, 2007
Last sequence update: November 22, 2005
Last modified: May 23, 2018
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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