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Q3BVT8

- Q3BVT8_XANC5

UniProt

Q3BVT8 - Q3BVT8_XANC5

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Protein
Submitted name: ATP-dependent DNA ligase
Gene
XCV1394
Organism
Xanthomonas campestris pv. vesicatoria (strain 85-10)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciXCAM316273:GJF8-1434-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:XCV1394Imported
OrganismiXanthomonas campestris pv. vesicatoria (strain 85-10)
Taxonomic identifieri316273 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
ProteomesiUP000007069: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi316273.XCV1394.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiKSASTHN.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3BVT8-1 [UniParc]FASTAAdd to Basket

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MKRFAALYRA LDRSTGTLDK RAALVAYFRD APALDAAWAL YLLAGGKVAS    50
ARMRIASSGE LREWITDTAG VADWLVADSY DHVGDLAETL ALLLDDPVAE 100
AADLPLAEWI EQRLLPIANQ DVQVRKACIV QAWRSLAFDE RLVFNKLLTG 150
ALRVGVSQRL VQQALAELSG VDIARIAQRM LGSWRPHPTY LADLLTSEEL 200
PGDRQQPYPF FLASPLEAEV DTLGAIDDWL LEWKWDGIRL QLIRRAGEAA 250
LWSRGEERLD GRFPEIEHAA LQLPDGTVID GELLAWQPEQ PLPMPFTALQ 300
TRIQRLKPGP KTLAAAPARV VAYDLLELAG EDLRERPLQE RRALLEGVLA 350
TLADPRIVAS PLVQVSDWQA AAQVRVEARE RGVEGLMLKR ASSVYQSGRR 400
RGDWWKWKID PLTIDAVLLY AQAGHGRRST LYTDYTFGLW HEGQLVPIAK 450
AYSGLDDKEI LQLDRWIRAN TTERFGPVRA VTAHHVFELG FEAVNRSARH 500
KSGIAVRFPR ILRWRHDKPM AEADHLSTLQ ALAR 534
Length:534
Mass (Da):59,895
Last modified:November 22, 2005 - v1
Checksum:i54DE1A76571E9A7E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM039952 Genomic DNA. Translation: CAJ23025.1.
RefSeqiWP_011346833.1. NC_007508.1.
YP_363125.1. NC_007508.1.

Genome annotation databases

EnsemblBacteriaiCAJ23025; CAJ23025; XCV1394.
GeneIDi3731460.
KEGGixcv:XCV1394.
PATRICi24092252. VBIXanCam71633_1621.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM039952 Genomic DNA. Translation: CAJ23025.1 .
RefSeqi WP_011346833.1. NC_007508.1.
YP_363125.1. NC_007508.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 316273.XCV1394.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAJ23025 ; CAJ23025 ; XCV1394 .
GeneIDi 3731460.
KEGGi xcv:XCV1394.
PATRICi 24092252. VBIXanCam71633_1621.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi KSASTHN.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci XCAM316273:GJF8-1434-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 85-10Imported.

Entry informationi

Entry nameiQ3BVT8_XANC5
AccessioniPrimary (citable) accession number: Q3BVT8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: September 3, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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