Q3BTA4 (Q3BTA4_XANC5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pectate lyase EMBL CAJ23955.1
EC=4.2.2.2 EMBL CAJ23955.1

Gene names

Ordered Locus Names:

XCV2278

Organism

Xanthomonas campestris pv. vesicatoria (strain 85-10) [Complete proteome] [HAMAP]

Taxonomic identifier

316273 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas

Protein attributes

Sequence length	440 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL CAJ23955.1
Molecular function	Lyase EMBL CAJ23955.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	pectate lyase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 24	24	Potential EMBL CAJ23955.1
	Chain	25 – 440	416	Potential EMBL CAJ23955.1		PRO_5000075606

Sequences

	Sequence		Length	Mass (Da)
	Q3BTA4 [UniParc]. Last modified November 22, 2005. Version 1. Checksum: B7BBF0CB85F9EBF5	FASTA	440	46,759
	10 20 30 40 50 60 MNLSLRTIVA IAVAACVPPC TAVAADWYIA PTGNDGNPGT RAAPFASVMA AQAAASSGDT 70 80 90 100 110 120 VYLRGGTYRL TSANISVVRQ PYAVVNEITK PGIAYVNVAN ERPVFDFSAV TPTGLRVAAF 130 140 150 160 170 180 RVASNNCVFR GFEVVGVRIT IADRLTQSEA FRVDRGNGNL FENLAIHDGQ AIGWYLVSGS 190 200 210 220 230 240 DNRVHNVDAY NNRGLNAFSD GNIDGFGVHP TLAGSSGNLI EGSRAWFNSD DGFDLINAAA 250 260 270 280 290 300 AVTLQRNWSF YNGYDSAFTP LGNGAGFKAG GYGRNGSDYP KPVPRHIVRF NLAVGNRSNG 310 320 330 340 350 360 LYANHHIGGQ EWISNTSIKN GRANYDMQST LSNNLTDVPG YDHHLANNLG FGTRIEMINL 370 380 390 400 410 420 GSASENDIGR NSFNLPLVVS AGDFVSLDER QLMRPRQANG DLPIITFATL APGSALIDAG 430 440 ADTGEAFNGR APDLGAFEAR

References

[1]

"Insights into genome plasticity and pathogenicity of the plant pathogenic Bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence." Thieme F., Koebnik R., Bekel T., Berger C., Boch J., Buettner D., Caldana C., Gaigalat L., Goesmann A., Kay S., Kirchner O., Lanz C., Linke B., McHardy A.C., Meyer F., Mittenhuber G., Nies D.H., Niesbach-Kloesgen U. , Patschkowski T., Rueckert C., Rupp O., Schneiker S., Schuster S.C., Vorhoelter F.J., Weber E., Puehler A., Bonas U., Bartels D., Kaiser O. J. Bacteriol. 187:7254-7266(2005) [PubMed: 16237009] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM039952 Genomic DNA. Translation: CAJ23955.1.
RefSeq	YP_364009.1. NC_007508.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q3BTA4.
Protein family/group databases
CAZy	PL9. Polysaccharide Lyase Family 9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3730579.
GenomeReviews	Gene locus XCV2278 in contig AM039952_GR.
KEGG	xcv:XCV2278.
NMPDR	fig|316273.3.peg.2746.
PATRIC	24094114. VBIXanCam71633_2538.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG87958.
HOGENOM	HBG584769.
OMA	DSHHNYD.
ProtClustDB	CLSK2526703.
Family and domain databases
InterPro	IPR006626. PbH1. IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
KO	K01728.
SMART	SM00710. PbH1. 4 hits. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q3BTA4_XANC5

Accession

Primary (citable) accession number: Q3BTA4

Entry history

Integrated into UniProtKB/TrEMBL:	November 22, 2005
Last sequence update:	November 22, 2005
Last modified:	December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)