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Protein

Exodeoxyribonuclease 7 large subunit

Gene

xseA

Organism
Xanthomonas campestris pv. vesicatoria (strain 85-10)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.UniRule annotation

Catalytic activityi

Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Exonuclease, Hydrolase, Nuclease

Enzyme and pathway databases

BioCyciXCAM316273:GJF8-2685-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Exodeoxyribonuclease 7 large subunitUniRule annotation (EC:3.1.11.6UniRule annotation)
Alternative name(s):
Exodeoxyribonuclease VII large subunitUniRule annotation
Short name:
Exonuclease VII large subunitUniRule annotation
Gene namesi
Name:xseAUniRule annotation
Ordered Locus Names:XCV2607
OrganismiXanthomonas campestris pv. vesicatoria (strain 85-10)
Taxonomic identifieri316273 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
Proteomesi
  • UP000007069 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 445445Exodeoxyribonuclease 7 large subunitPRO_0000273702Add
BLAST

Interactioni

Subunit structurei

Heterooligomer composed of large and small subunits.UniRule annotation

Protein-protein interaction databases

STRINGi316273.XCV2607.

Family & Domainsi

Sequence similaritiesi

Belongs to the XseA family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105DVS. Bacteria.
COG1570. LUCA.
HOGENOMiHOG000229265.
KOiK03601.
OMAiYTRFENI.
OrthoDBiPOG091H02EK.

Family and domain databases

HAMAPiMF_00378. Exonuc_7_L. 1 hit.
InterProiIPR003753. Exonuc_VII_L.
IPR020579. Exonuc_VII_lsu_C.
IPR025824. OB-fold_nuc-bd_dom.
[Graphical view]
PfamiPF02601. Exonuc_VII_L. 1 hit.
PF13742. tRNA_anti_2. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00237. xseA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3BSC5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADRNDQILT PSQLNSLARD LLEGSFPLVW VEAELSSVTR PASGHLYFTL
60 70 80 90 100
KDARAQIRCA MFKPKSTWLK FQPREGLRVL ARGRLTLYEA RGDYQLVLDH
110 120 130 140 150
MEEAGEGALR RAFDELRARL AAEGLFDAER KQALPAHVQR LAVITSPSGA
160 170 180 190 200
AVRDVLSVLA RRFPLLEVDL LPSLVQGDSA AAQITSLLQR ADASGRYDVI
210 220 230 240 250
LITRGGGSLE DLWAFNDERL ARAIAAAQTP VVSAVGHETD FSLSDFVADV
260 270 280 290 300
RAPTPSVAAE LLVPDQRELV ARVRRAQARM TQLQQHALGN AMQRADRLAL
310 320 330 340 350
RLRAQSPQAR LQLLHRRQQD AGRQLRARMM QVLERLQARV QQGQAQLQAH
360 370 380 390 400
NPQRQLAGLQ QRLRALHPQA AMQRRLQHDQ LQLRSIARSL EAVSPLATVA
410 420 430 440
RGYAIVTRPA DGSVVRSAAE VVTGERLRAQ LADGSIQVRV ESGES
Length:445
Mass (Da):49,220
Last modified:November 22, 2005 - v1
Checksum:i5AD4537FCDF1A7C6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM039952 Genomic DNA. Translation: CAJ24284.1.
RefSeqiWP_011347754.1. NC_007508.1.

Genome annotation databases

EnsemblBacteriaiCAJ24284; CAJ24284; XCV2607.
KEGGixcv:XCV2607.
PATRICi24094758. VBIXanCam71633_2856.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM039952 Genomic DNA. Translation: CAJ24284.1.
RefSeqiWP_011347754.1. NC_007508.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi316273.XCV2607.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAJ24284; CAJ24284; XCV2607.
KEGGixcv:XCV2607.
PATRICi24094758. VBIXanCam71633_2856.

Phylogenomic databases

eggNOGiENOG4105DVS. Bacteria.
COG1570. LUCA.
HOGENOMiHOG000229265.
KOiK03601.
OMAiYTRFENI.
OrthoDBiPOG091H02EK.

Enzyme and pathway databases

BioCyciXCAM316273:GJF8-2685-MONOMER.

Family and domain databases

HAMAPiMF_00378. Exonuc_7_L. 1 hit.
InterProiIPR003753. Exonuc_VII_L.
IPR020579. Exonuc_VII_lsu_C.
IPR025824. OB-fold_nuc-bd_dom.
[Graphical view]
PfamiPF02601. Exonuc_VII_L. 1 hit.
PF13742. tRNA_anti_2. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00237. xseA. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiEX7L_XANC5
AccessioniPrimary (citable) accession number: Q3BSC5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 23, 2007
Last sequence update: November 22, 2005
Last modified: September 7, 2016
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.