Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q3BMF2

- XYLA_XANC5

UniProt

Q3BMF2 - XYLA_XANC5

Protein

Xylose isomerase

Gene

xylA1

Organism
Xanthomonas campestris pv. vesicatoria (strain 85-10)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 58 (01 Oct 2014)
      Sequence version 1 (22 Nov 2005)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotation

    Cofactori

    Binds 2 magnesium ions per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei109 – 1091UniRule annotation
    Active sitei112 – 1121UniRule annotation
    Metal bindingi240 – 2401Magnesium 1UniRule annotation
    Metal bindingi276 – 2761Magnesium 1UniRule annotation
    Metal bindingi276 – 2761Magnesium 2UniRule annotation
    Metal bindingi279 – 2791Magnesium 2UniRule annotation
    Metal bindingi304 – 3041Magnesium 1UniRule annotation
    Metal bindingi315 – 3151Magnesium 2UniRule annotation
    Metal bindingi317 – 3171Magnesium 2UniRule annotation
    Metal bindingi347 – 3471Magnesium 1UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. xylose isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-HAMAP
    2. pentose-phosphate shunt Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Isomerase

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shunt, Xylose metabolism

    Keywords - Ligandi

    Magnesium, Metal-binding

    Enzyme and pathway databases

    BioCyciXCAM316273:GJF8-1856-MONOMER.
    XCAM316273:GJF8-4444-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Name:xylA1UniRule annotation
    Ordered Locus Names:XCV1808, XCV4330
    OrganismiXanthomonas campestris pv. vesicatoria (strain 85-10)
    Taxonomic identifieri316273 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
    ProteomesiUP000007069: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 445445Xylose isomerasePRO_0000236977Add
    BLAST

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Protein-protein interaction databases

    STRINGi316273.XCV4330.

    Structurei

    3D structure databases

    ProteinModelPortaliQ3BMF2.
    SMRiQ3BMF2. Positions 10-444.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2115.
    HOGENOMiHOG000252293.
    KOiK01805.
    OMAiLFHAHIG.
    OrthoDBiEOG62NX4R.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    HAMAPiMF_00455. Xylose_isom_A.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    PRINTSiPR00688. XYLOSISMRASE.
    SUPFAMiSSF51658. SSF51658. 1 hit.
    TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q3BMF2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSNTVYIGAK EYFPGIGKIG FEGRDSDNPL AFKVYDANKT IGDKTMAEHL    50
    RFAVAYWHSF CGNGADPFGP GTRAYPWDAG TTALNRAEAK ADAAFEFFTK 100
    LGVPYYCFHD IDLAPDADDI GEYEKNLKHM VGIAKQRQAD TGIKLLWGTA 150
    NLFSHPRYMN GASTNPDFNV VARAAVQVKA AIDATVELGG ENYVFWGGRE 200
    GYACLHNTQM KREQDNMARF LTLARDYGRA IGFKGNFLIE PKPMEPMKHQ 250
    YDFDSATVIG FLRQHGLDQD FKLNIEANHA TLSGHSFEHD LQVASDAGLL 300
    GSIDANRGNP QNGWDTDQFP TDLYDTVGAM LVVLRQGGLA PGGLNFDAKV 350
    RRESSDPQDL FLAHIGGMDA FARGLEVANA LLTASPLEQW RAERYASFDS 400
    GAGADFAAGK TTLADLAKHA ASNAPQQLSG RQEAYENLIN QYLTR 445
    Length:445
    Mass (Da):48,791
    Last modified:November 22, 2005 - v1
    Checksum:i4249F0C771C88ECD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM039952 Genomic DNA. Translation: CAJ26061.1.
    AM039952 Genomic DNA. Translation: CAJ23485.1.
    RefSeqiWP_011347136.1. NC_007508.1.
    YP_363539.1. NC_007508.1.
    YP_366061.1. NC_007508.1.

    Genome annotation databases

    EnsemblBacteriaiCAJ23485; CAJ23485; XCV1808.
    CAJ26061; CAJ26061; XCV4330.
    GeneIDi3729337.
    3731186.
    KEGGixcv:XCV1808.
    xcv:XCV4330.
    PATRICi24093160. VBIXanCam71633_2069.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM039952 Genomic DNA. Translation: CAJ26061.1 .
    AM039952 Genomic DNA. Translation: CAJ23485.1 .
    RefSeqi WP_011347136.1. NC_007508.1.
    YP_363539.1. NC_007508.1.
    YP_366061.1. NC_007508.1.

    3D structure databases

    ProteinModelPortali Q3BMF2.
    SMRi Q3BMF2. Positions 10-444.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 316273.XCV4330.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAJ23485 ; CAJ23485 ; XCV1808 .
    CAJ26061 ; CAJ26061 ; XCV4330 .
    GeneIDi 3729337.
    3731186.
    KEGGi xcv:XCV1808.
    xcv:XCV4330.
    PATRICi 24093160. VBIXanCam71633_2069.

    Phylogenomic databases

    eggNOGi COG2115.
    HOGENOMi HOG000252293.
    KOi K01805.
    OMAi LFHAHIG.
    OrthoDBi EOG62NX4R.

    Enzyme and pathway databases

    BioCyci XCAM316273:GJF8-1856-MONOMER.
    XCAM316273:GJF8-4444-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    HAMAPi MF_00455. Xylose_isom_A.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    PRINTSi PR00688. XYLOSISMRASE.
    SUPFAMi SSF51658. SSF51658. 1 hit.
    TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 85-10.

    Entry informationi

    Entry nameiXYLA_XANC5
    AccessioniPrimary (citable) accession number: Q3BMF2
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 30, 2006
    Last sequence update: November 22, 2005
    Last modified: October 1, 2014
    This is version 58 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3