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Q3BME6 (Q3BME6_XANC5) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Xylosidase EMBL CAJ26067.1
EC=3.2.1.37 EMBL CAJ26067.1
Gene names
Name:xylB3 EMBL CAJ26067.1
Ordered Locus Names:XCV4336
OrganismXanthomonas campestris pv. vesicatoria (strain 85-10) [Complete proteome] [HAMAP]
Taxonomic identifier316273 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas

Protein attributes

Sequence length564 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL CAJ26067.1
   Molecular functionGlycosidase EMBL CAJ26067.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionxylan 1,4-beta-xylosidase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2323 Potential EMBL CAJ26067.1
Chain24 – 564541 Potential EMBL CAJ26067.1
PRO_5000075958

Sequences

Sequence LengthMass (Da)Tools
Q3BME6 [UniParc].

Last modified November 22, 2005. Version 1.
Checksum: 37B1D6B12E970404

FASTA56461,563
        10         20         30         40         50         60 
MRAFSATCVA LLMALAVPAN AQAQAAADVA FDWFEYRGDD AVFATPLPAG HYRNPVLAGF 

        70         80         90        100        110        120 
YPDPSITRVG ERYYLVNSTF TYFPAIPVLE STDLVHWTQI GNVVERREQL DYDGLRMSRG 

       130        140        150        160        170        180 
MYAASIRHHD GRFYVVGTSV DSGGNFIASA SNAAGPWSAL TWLPSIDGID PSLFFDTDGS 

       190        200        210        220        230        240 
AYLLNNGPPE GTPLYDGHRA IWMQRFDIAK NAPVGPRKVL LNGGVDLASK PIWIEGPHLY 

       250        260        270        280        290        300 
QRDGWYYLSC AEGGTGPQHS QVVLRSRNVW GPYAPAPNNP ILTQRDLPAG RAHPVSNAGH 

       310        320        330        340        350        360 
VDLVDTPDGQ WWAVFLASRP YRGDHYNTGR ETFLLPVQWR DGWPSILPAG QPIPYIAKAP 

       370        380        390        400        410        420 
AGMKAVATQA PLSGNFVWHD DFDQATLQRE WLTVRVPKHD VADLRTRAGW LTLHASSQGL 

       430        440        450        460        470        480 
DGTGTPAFLA RRQQHLRFTA STALEVPTQA GISAGLAAFQ NSTAWYALGA RRDGDAVQVF 

       490        500        510        520        530        540 
LDKREGAATT TLAQTRIPAT AQLRLQISGD GGAYSFAFDA DGRGWQWLRR NDDASFLSTE 

       550        560 
KAGGFVGSVI GPFAQSHPDR PSQD

« Hide

References

[1]"Insights into genome plasticity and pathogenicity of the plant pathogenic Bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence."
Thieme F., Koebnik R., Bekel T., Berger C., Boch J., Buettner D., Caldana C., Gaigalat L., Goesmann A., Kay S., Kirchner O., Lanz C., Linke B., McHardy A.C., Meyer F., Mittenhuber G., Nies D.H., Niesbach-Kloesgen U. expand/collapse author list , Patschkowski T., Rueckert C., Rupp O., Schneiker S., Schuster S.C., Vorhoelter F.J., Weber E., Puehler A., Bonas U., Bartels D., Kaiser O.
J. Bacteriol. 187:7254-7266(2005) [PubMed: 16237009] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM039952 Genomic DNA. Translation: CAJ26067.1.
RefSeqYP_366067.1. NC_007508.1.

3D structure databases

ProteinModelPortalQ3BME6.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ3BME6.

Protein family/group databases

CAZyGH43. Glycoside Hydrolase Family 43.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3730505.
GenomeReviewsGene locus XCV4336 in contig AM039952_GR.
KEGGxcv:XCV4336.
NMPDRfig|316273.3.peg.4346.
PATRIC24098344. VBIXanCam71633_4632.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3507.
HOGENOMHBG347235.
OMAPIWIEAP.
ProtClustDBCLSK753085.

Family and domain databases

InterProIPR008985. ConA-like_lec_gl.
IPR013320. ConA-like_subgrp.
IPR006710. Glyco_hydro_43.
IPR023296. Glyco_hydro_43_beta-prop.
[Graphical view]
Gene3DG3DSA:2.60.120.200. ConA_like_subgrp. 1 hit.
G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
KOK01198.
K01209.
PANTHERPTHR22925. Glyco_hydro_43. 1 hit.
PfamPF04616. Glyco_hydro_43. 1 hit.
[Graphical view]
SUPFAMSSF49899. ConA_like_lec_gl. 1 hit.
SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ3BME6_XANC5
AccessionPrimary (citable) accession number: Q3BME6
Entry history
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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