Q3BMC7 (Q3BMC7_XANC5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endo-1,4-beta-xylanase A EMBL CAJ26086.1
EC=3.2.1.8 EMBL CAJ26086.1

Gene names

Name:	xynA EMBL CAJ26086.1
Ordered Locus Names:	XCV4355

Organism

Xanthomonas campestris pv. vesicatoria (strain 85-10) [Complete proteome] [HAMAP]

Taxonomic identifier

316273 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas

Protein attributes

Sequence length	410 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 10 (cellulase F) family. RuleBase RU003432

Ontologies

Keywords
Biological process	Xylan degradation EMBL CAJ26086.1
Molecular function	Glycosidase RuleBase RU003432 EMBL CAJ26086.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro endo-1,4-beta-xylanase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3BMC7 [UniParc]. Last modified November 22, 2005. Version 1. Checksum: F8D93DB92F772020	FASTA	410	45,375
	10 20 30 40 50 60 MRSSAIETCD LSTDLLMHIN RANLTKRLGL LIAGLSAVCT LQALAACGTP GTSLKQAYAQ 70 80 90 100 110 120 GFLLGTAVNA DIVSGKDAAS AALAACHFNA VTAENVMKAE VVAPRRGVQD FSAADAFVAY 130 140 150 160 170 180 AQRNRQFVVG HTLVWHNQTP EWFFTTADGR PNTPAQQLER MRAHIAAVAG RYTGKVQAWD 190 200 210 220 230 240 VVNEIIDEDG SYRSTNWVQR VGDGDTVVRN AFTFAQRYAP DAQLYYNDFN AWRPAKRDGI 250 260 270 280 290 300 VRMVKMLQQA GVRIDGVGMQ GHWGLNYPSL RDIEDAIDAY AALGVKVMIT ELDIDVLPLT 310 320 330 340 350 360 KEGQIIGTGM AHKQFQLPEF KRFLDPYRDG LPADVQAQLR DRYAELFALF WRKRDKIARV 370 380 390 400 410 SVWGVSDDMS WKNDYPVPGR TNYPLLFDRN HQPKPALDAV LAVPTATAAR

References

[1]

"Insights into genome plasticity and pathogenicity of the plant pathogenic Bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence." Thieme F., Koebnik R., Bekel T., Berger C., Boch J., Buettner D., Caldana C., Gaigalat L., Goesmann A., Kay S., Kirchner O., Lanz C., Linke B., McHardy A.C., Meyer F., Mittenhuber G., Nies D.H., Niesbach-Kloesgen U. , Patschkowski T., Rueckert C., Rupp O., Schneiker S., Schuster S.C., Vorhoelter F.J., Weber E., Puehler A., Bonas U., Bartels D., Kaiser O. J. Bacteriol. 187:7254-7266(2005) [PubMed: 16237009] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM039952 Genomic DNA. Translation: CAJ26086.1.
RefSeq	YP_366086.1. NC_007508.1.
3D structure databases
ProteinModelPortal	Q3BMC7.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3BMC7.
Protein family/group databases
CAZy	GH10. Glycoside Hydrolase Family 10.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3730508.
GenomeReviews	Gene locus XCV4355 in contig AM039952_GR.
KEGG	xcv:XCV4355.
NMPDR	fig|316273.3.peg.4382.
PATRIC	24098382. VBIXanCam71633_4651.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3693.
HOGENOM	HBG626574.
OMA	MITELDV.
ProtClustDB	CLSK813220.
Family and domain databases
InterPro	IPR001000. Glyco_hydro_10. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01181.
Pfam	PF00331. Glyco_hydro_10. 1 hit. [Graphical view]
PRINTS	PR00134. GLHYDRLASE10.
SMART	SM00633. Glyco_10. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00591. GLYCOSYL_HYDROL_F10. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3BMC7_XANC5

Accession

Primary (citable) accession number: Q3BMC7

Entry history

Integrated into UniProtKB/TrEMBL:	November 22, 2005
Last sequence update:	November 22, 2005
Last modified:	December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)