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Protein
Submitted name:

Chloroplast chlorophyll a/b-binding protein CP29 Lhcb4

Gene
N/A
Organism
Ostreococcus tauri
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

  1. photosynthesis, light harvesting Source: InterPro
Complete GO annotation...

Keywords - Biological processi

Photosynthesis

Keywords - Ligandi

ChlorophyllSAAS annotation, Chromophore

Names & Taxonomyi

Protein namesi
Submitted name:
Chloroplast chlorophyll a/b-binding protein CP29 Lhcb4Imported
OrganismiOstreococcus tauriImported
Taxonomic identifieri70448 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaprasinophytesMamiellophyceaeMamiellalesBathycoccaceaeOstreococcus

Subcellular locationi

GO - Cellular componenti

  1. membrane Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

ChloroplastSAAS annotation, Membrane, Photosystem IISAAS annotation, Plastid, ThylakoidSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi70448.Q3B9U8.

Structurei

3D structure databases

ProteinModelPortaliQ3B9U8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

TransmembraneSAAS annotation

Phylogenomic databases

eggNOGiNOG319330.
HOGENOMiHOG000238033.
KOiK08915.
OMAiRECELLH.

Family and domain databases

Gene3Di1.10.3460.10. 2 hits.
InterProiIPR001344. Chloro_AB-bd_pln.
IPR022796. Chloroa_b-bind.
IPR023329. Chlorophyll_a/b-bd_dom.
[Graphical view]
PANTHERiPTHR21649. PTHR21649. 1 hit.
PfamiPF00504. Chloroa_b-bind. 1 hit.
[Graphical view]
SUPFAMiSSF103511. SSF103511. 2 hits.

Sequencei

Sequence statusi: Complete.

Q3B9U8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFKSKAPTKQ VAVKKAPVKT AVKKTARPVR KGPAPKAGDE CLWRPGAVRP
60 70 80 90 100
AWLDGSLPGD RGFDPFGLGK PAEYLQFDLD ALDGSAARNP SGNVIGKLKK
110 120 130 140 150
ADSKPKARTI VPYDEAFDIM RFRECELLHS RWAMLGLVGA AAAEAATGIT
160 170 180 190 200
WADAGKIELE QPQYLGFPIQ LTVTQLTIIE VLAMGYLEIA RSAELDQNKR
210 220 230 240 250
MYPGGAFDPL GYVAKADAQE EFRLKTAELK HGRLAMAGML IISIEAATGR

GTLPGSW
Length:257
Mass (Da):27,779
Last modified:November 22, 2005 - v1
Checksum:i8B2B7B07024D5ABC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY954732 Genomic DNA. Translation: AAY27543.1.
RefSeqiXP_003083704.1. XM_003083656.1.

Genome annotation databases

GeneIDi9831137.
KEGGiota:Ot16g02550.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY954732 Genomic DNA. Translation: AAY27543.1.
RefSeqiXP_003083704.1. XM_003083656.1.

3D structure databases

ProteinModelPortaliQ3B9U8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi70448.Q3B9U8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi9831137.
KEGGiota:Ot16g02550.

Phylogenomic databases

eggNOGiNOG319330.
HOGENOMiHOG000238033.
KOiK08915.
OMAiRECELLH.

Family and domain databases

Gene3Di1.10.3460.10. 2 hits.
InterProiIPR001344. Chloro_AB-bd_pln.
IPR022796. Chloroa_b-bind.
IPR023329. Chlorophyll_a/b-bd_dom.
[Graphical view]
PANTHERiPTHR21649. PTHR21649. 1 hit.
PfamiPF00504. Chloroa_b-bind. 1 hit.
[Graphical view]
SUPFAMiSSF103511. SSF103511. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "New insights into the nature and phylogeny of prasinophyte antenna proteins: Ostreococcus tauri, a case study."
    Six C., Worden A.Z., Rodriguez F., Moreau H., Partensky F.
    Mol. Biol. Evol. 22:2217-2230(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ3B9U8_OSTTA
AccessioniPrimary (citable) accession number: Q3B9U8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: February 4, 2015
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.