Unreviewed, UniProtKB/TrEMBL Q3B8R0 (Q3B8R0_RAT)

Names and origin

Protein names

Submitted name:
    Ext1 protein EMBL AAI05840.1

Gene names

Name:	Ext1 EMBL AAI05840.1 RGD 1587375
Synonyms:	LOC299907 RGD 1587375

Organism

Rattus norvegicus (Rat) EMBL AAI05840.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	557 AA.
Sequence status	Fragment.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

Ontologies

Gene Ontology (GO)
Biological process	endoderm development Inferred from electronic annotation. Source: Compara gastrulation Inferred from electronic annotation. Source: Compara mesoderm development Inferred from electronic annotation. Source: Compara
Cellular component	integral to endoplasmic reticulum membrane Inferred from electronic annotation. Source: Compara
Molecular function	N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity Inferred from electronic annotation. Source: Compara glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity Inferred from electronic annotation. Source: Compara
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL AAI05840.1

Sequences

	Sequence		Length	Mass (Da)
	Q3B8R0-1 [UniParc]. Last modified November 22, 2005. Version 1. Checksum: 6CD0667CA036B84F	FASTA	557	64,369
	10 20 30 40 50 60 HLIFNLYSGT WPDYTEDVGF DIGQAMLAKA SISTENFRPN FDVSIPLFSK DHPRTGGERG 70 80 90 100 110 120 FLKFNTIPPL RKYMLVFKGK RYLTGIGSDT RNALYHVHNG EDVLLLTTCK HGKDWQKHKD 130 140 150 160 170 180 SRCDRDNTEY EKYDYREMLH NATFCLVPRG RRLGSFRFLE ALQAACVPVM LSNGWELPFS 190 200 210 220 230 240 EVINWNQAAV IGDERLLLQI PSTIRSIHQD KILALRQQTQ FLWEAYFSSV EKIVLTTLEI 250 260 270 280 290 300 IQDRIFKHIS RNSLIWNKHP GGLFVLPQYS SYLGDFPYYY ANLGLKPPSK FTAVIHAVTP 310 320 330 340 350 360 LVSQSQPVLK LLVAAAKSQY CAQIIVLWNC DKPLPAKHRW PATAVPVIVI EGESKVMSSR 370 380 390 400 410 420 FLPYDNIITD AVLSLDEDTV LSTTEVDFAF TVWQSFPERI VGYPARSHFW DNSKERWGYT 430 440 450 460 470 480 SKWTNDYSMV LTGAAIYHKY YHYLYSHYLP ASLKNMVDQL ANCEDILMNF LVSAVTKLPP 490 500 510 520 530 540 IKVTQKKQYK ETMMGQTSRA SRWADPDHFA QRQSCMNTFA SWFGYMPLIH SQMRLDPVLF 550 KDQVSILRKK YRDIERL

References

[1]	"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Testis EMBL AAI05840.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	BC105839 mRNA. Translation: AAI05840.1.
IPI	IPI00370669.
UniGene	Rn.106323
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q3B8R0.
Protein family/group databases
CAZy	GT47. Glycosyltransferase Family 47. GT64. Glycosyltransferase Family 64.
Genome annotation databases
Ensembl	ENSRNOT00000037809; ENSRNOP00000031943; ENSRNOG00000024886; Rattus norvegicus. [Genome view]
Organism-specific databases
RGD	1587375. Ext1.
Phylogenomic databases
HOVERGEN	Q3B8R0.
OrthoDB	EOG9DJNGS
PhylomeDB	Q3B8R0.
Gene expression databases
ArrayExpress	Q3B8R0.
Genevestigator	Q3B8R0.
Family and domain databases
InterPro	IPR004263. Exostosin. IPR015338. HexNAc_Trfase_a. [Graphical view]
Pfam	PF03016. Exostosin. 1 hit. PF09258. Glyco_transf_64. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3B8R0_RAT

Accession

Primary (citable) accession number: Q3B8R0

Entry history

Integrated into UniProtKB/TrEMBL:	November 22, 2005
Last sequence update:	November 22, 2005
Last modified:	November 24, 2009
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)