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Protein
Submitted name:

Ubiquitin A-52 residue ribosomal protein fusion product 1

Gene

uba52

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
Ubiquitin A-52 residue ribosomal protein fusion product 1Imported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:uba52Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 2

Organism-specific databases

ZFINiZDB-GENE-051023-7. uba52.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

BgeeiENSDARG00000041435.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000060744.

Structurei

3D structure databases

SMRiQ3B7P7. Positions 1-75.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 7676Ubiquitin-likeInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG0003. Eukaryota.
COG1552. LUCA.
COG5272. LUCA.
GeneTreeiENSGT00840000129851.
HOGENOMiHOG000233942.
HOVERGENiHBG052927.
KOiK02927.
OMAiKTKCGHT.
OrthoDBiEOG091G178I.
PhylomeDBiQ3B7P7.
TreeFamiTF352129.

Family and domain databases

InterProiIPR001975. Ribosomal_L40e.
IPR011332. Ribosomal_zn-bd.
IPR019956. Ubiquitin.
IPR029071. Ubiquitin-rel_dom.
IPR019954. Ubiquitin_CS.
IPR000626. Ubiquitin_dom.
[Graphical view]
PfamiPF01020. Ribosomal_L40e. 1 hit.
PF00240. ubiquitin. 1 hit.
[Graphical view]
PRINTSiPR00348. UBIQUITIN.
SMARTiSM01377. Ribosomal_L40e. 1 hit.
SM00213. UBQ. 1 hit.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.
SSF57829. SSF57829. 1 hit.
PROSITEiPS00299. UBIQUITIN_1. 1 hit.
PS50053. UBIQUITIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3B7P7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQIFVKTLTG KTITLEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL
60 70 80 90 100
EDGRTLSDYN IQKESTLHLV LRLRGGIIEP SLRQLAQKYN CEKMICRKCY
110 120
ARLHPRAVNC RKKKCGHTNN LRPKKKLK
Length:128
Mass (Da):14,756
Last modified:November 22, 2005 - v1
Checksum:i7BDE802ABF51CA9A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU693374 Genomic DNA. No translation available.
BC105746 mRNA. Translation: AAI05747.1.
BC107517 mRNA. Translation: AAI07518.1.
RefSeqiNP_001032190.1. NM_001037113.1.
UniGeneiDr.35198.

Genome annotation databases

EnsembliENSDART00000060745; ENSDARP00000060744; ENSDARG00000041435.
GeneIDi641289.
KEGGidre:641289.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU693374 Genomic DNA. No translation available.
BC105746 mRNA. Translation: AAI05747.1.
BC107517 mRNA. Translation: AAI07518.1.
RefSeqiNP_001032190.1. NM_001037113.1.
UniGeneiDr.35198.

3D structure databases

SMRiQ3B7P7. Positions 1-75.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000060744.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000060745; ENSDARP00000060744; ENSDARG00000041435.
GeneIDi641289.
KEGGidre:641289.

Organism-specific databases

CTDi7311.
ZFINiZDB-GENE-051023-7. uba52.

Phylogenomic databases

eggNOGiKOG0003. Eukaryota.
COG1552. LUCA.
COG5272. LUCA.
GeneTreeiENSGT00840000129851.
HOGENOMiHOG000233942.
HOVERGENiHBG052927.
KOiK02927.
OMAiKTKCGHT.
OrthoDBiEOG091G178I.
PhylomeDBiQ3B7P7.
TreeFamiTF352129.

Gene expression databases

BgeeiENSDARG00000041435.

Family and domain databases

InterProiIPR001975. Ribosomal_L40e.
IPR011332. Ribosomal_zn-bd.
IPR019956. Ubiquitin.
IPR029071. Ubiquitin-rel_dom.
IPR019954. Ubiquitin_CS.
IPR000626. Ubiquitin_dom.
[Graphical view]
PfamiPF01020. Ribosomal_L40e. 1 hit.
PF00240. ubiquitin. 1 hit.
[Graphical view]
PRINTSiPR00348. UBIQUITIN.
SMARTiSM01377. Ribosomal_L40e. 1 hit.
SM00213. UBQ. 1 hit.
[Graphical view]
SUPFAMiSSF54236. SSF54236. 1 hit.
SSF57829. SSF57829. 1 hit.
PROSITEiPS00299. UBIQUITIN_1. 1 hit.
PS50053. UBIQUITIN_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ3B7P7_DANRE
AccessioniPrimary (citable) accession number: Q3B7P7
Entry historyi
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: September 7, 2016
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.