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Q3B6X2 (Q3B6X2_PELLD) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length489 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the attachment of glycine to tRNA(Gly) By similarity. HAMAP-Rule MF_00253 SAAS SAAS022961

Catalytic activity

ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly). HAMAP-Rule MF_00253 SAAS SAAS022961

Subunit structure

Homodimer By similarity. HAMAP-Rule MF_00253 SAAS SAAS022961

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00253 SAAS SAAS022961.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP-Rule MF_00253

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding234 – 2363ATP By similarity HAMAP-Rule MF_00253
Nucleotide binding244 – 2496ATP By similarity HAMAP-Rule MF_00253
Nucleotide binding317 – 3182ATP By similarity HAMAP-Rule MF_00253
Nucleotide binding361 – 3644ATP By similarity HAMAP-Rule MF_00253
Region249 – 2535Substrate binding By similarity HAMAP-Rule MF_00253
Region357 – 3615Substrate binding By similarity HAMAP-Rule MF_00253

Sites

Binding site1131Substrate By similarity HAMAP-Rule MF_00253
Binding site2021Substrate By similarity HAMAP-Rule MF_00253

Sequences

Sequence LengthMass (Da)Tools
Q3B6X2 [UniParc].

Last modified November 22, 2005. Version 1.
Checksum: 2A90D33EA9A8A171

FASTA48955,930
        10         20         30         40         50         60 
MTTPDTTRVQ GTSLSPDKVM HKLVSLAKRR GFIFPSSEIY GGLSSCFDYG PLGSEMKRNI 

        70         80         90        100        110        120 
KELWWNAMTR RHQNIVGIDA SIMMNPTVWE ASGHVASFND PMIDDRTTKR RYRADHLIEN 

       130        140        150        160        170        180 
HIEKLRRDGK DADALRVQMT YEACGASEEP NRALYELIID EGIKAPDTGS GDWTEVRQFN 

       190        200        210        220        230        240 
LMFQCNMGAV ADSSGVVYLR PETAQGIFVN FHNVRESSRM KVPFGIAQIG KAFRNEIVKG 

       250        260        270        280        290        300 
NFIFRMVEFE QMEMQYFVKP GTQAEAFEAW REERYQWYTR QLGIRPEKLH WYKHDKLAHY 

       310        320        330        340        350        360 
ADLAYDIKFE FPFGIEEIEG IHSRTDFDLS RHQEYSGKNM EYVDQVTNER FIPYVVETSA 

       370        380        390        400        410        420 
GCDRLFLAIL SDAYSEDVVD GEERVVLKLA PKVAPVKAAV LPLMKKGGMG EAAMKLRDEL 

       430        440        450        460        470        480 
AESFPVQYDD AASIGKRYRR QDEIGTPFCI TVDHQSIEDG TVTVRFRDTA QQERIDMSQT 


AAFITAKMA 

« Hide

References

[1]"Complete sequence of Pelodictyon luteolum DSM 273."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Bryant D., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P.
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 273.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000096 Genomic DNA. Translation: ABB22909.1.
RefSeqYP_373952.1. NC_007512.1.

3D structure databases

ProteinModelPortalQ3B6X2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING319225.Plut_0017.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABB22909; ABB22909; Plut_0017.
GeneID3745723.
KEGGplt:Plut_0017.
PATRIC21377432. VBIChlLut1287_0018.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0423.
HOGENOMHOG000242016.
KOK01880.
OMADIEFEFP.
OrthoDBEOG6R87F8.
ProtClustDBPRK04173.

Enzyme and pathway databases

BioCycPLUT319225:GHDM-17-MONOMER.

Family and domain databases

Gene3D3.40.50.800. 1 hit.
HAMAPMF_00253_B. Gly_tRNA_synth_B.
InterProIPR002314. aa-tRNA-synt_IIb_cons-dom.
IPR006195. aa-tRNA-synth_II.
IPR004154. Anticodon-bd.
IPR027031. Gly-tRNA_synthase/POLG2.
IPR022961. Gly_tRNA_ligase_bac.
IPR002315. tRNA-synt_gly.
[Graphical view]
PANTHERPTHR10745. PTHR10745. 1 hit.
PfamPF03129. HGTP_anticodon. 1 hit.
PF00587. tRNA-synt_2b. 1 hit.
[Graphical view]
PRINTSPR01043. TRNASYNTHGLY.
SUPFAMSSF52954. SSF52954. 1 hit.
TIGRFAMsTIGR00389. glyS_dimeric. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ3B6X2_PELLD
AccessionPrimary (citable) accession number: Q3B6X2
Entry history
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: February 19, 2014
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)