Q3AZA8 (RPIA_SYNS9) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Ribose-5-phosphate isomerase A
EC=5.3.1.6

Alternative name(s):
Phosphoriboisomerase A
Short name=PRI

Gene names

Name:	rpiA
Ordered Locus Names:	Syncc9902_0601

Organism

Synechococcus sp. (strain CC9902) [Complete proteome] [HAMAP]

Taxonomic identifier

316279 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	239 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family.

Ontologies

Keywords
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: InterPro
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 239	239	Ribose-5-phosphate isomerase A HAMAP MF_00170		PRO_1000017021

Sequences

	Sequence		Length	Mass (Da)
	Q3AZA8 [UniParc]. Last modified November 22, 2005. Version 1. Checksum: FBEBD8FD9557E6F3	FASTA	239	25,029
	10 20 30 40 50 60 MADLQTQMKH AVADAAVEQI KDGMVLGLGS GSTAALMIRA LGAKLASGEL KNIVGVTTSF 70 80 90 100 110 120 QGEVLAAELN IPLLSLNAVD RIDLAIDGAD EVDPSFQLIK GGGACHVQEK LVAAMADRFV 130 140 150 160 170 180 VVVDSTKLVD RLNLDFLLPV EVLPGAWRQI QKTLAAMGGS AELRMAQRKA GPVVTDQGNL 190 200 210 220 230 VLDVKLEGGI TDPASLEKAI NNVPGVLENG LFVNLTDEVL VGEISDGVAG VRSLERRLS

References

[1]

"Complete sequence of Synechococcus sp. CC9902." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Martinez M., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P. Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CC9902.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000097 Genomic DNA. Translation: ABB25569.1.
RefSeq	YP_376613.1. NC_007513.1.
3D structure databases
ProteinModelPortal	Q3AZA8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3AZA8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3742643.
GenomeReviews	Gene locus Syncc9902_0601 in contig CP000097_GR.
KEGG	sye:Syncc9902_0601.
PATRIC	23798387. VBISynSp76179_0658.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0120.
HOGENOM	HBG515603.
OMA	NLSLYVD.
PhylomeDB	Q3AZA8.
ProtClustDB	PRK00702.
Enzyme and pathway databases
BioCyc	SSP1131-1:SYNCC9902_0601-MONOMER.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. IPR014036. Tscrpt_reg_HTH_DeoR. [Graphical view]
KO	K01807.
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF00455. DeoR. 1 hit. PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. RpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RPIA_SYNS9

Accession

Primary (citable) accession number: Q3AZA8

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	November 22, 2005
Last modified:	January 25, 2012
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program