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Q3AY23 (Q3AY23_SYNS9) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Syncc9902_1040 EMBL ABB26004.1
OrganismSynechococcus sp. (strain CC9902) [Complete proteome] [HAMAP] EMBL ABB26004.1
Taxonomic identifier316279 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus

Protein attributes

Sequence length554 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q3AY23 [UniParc].

Last modified November 22, 2005. Version 1.
Checksum: 35EAC6B726C471C5

FASTA55463,671
        10         20         30         40         50         60 
MQAFQALFQQ LDQVTGTRAK VGLLVEHFRS VPAADAAWAL VLLLGKRRRR LITGRRLRTI 

        70         80         90        100        110        120 
LEQRGGIPEW LVAECHGQVG DSAETITLLW PAVSTKIGLV ESNLPTLPVD QPLHWWMDTL 

       130        140        150        160        170        180 
LPTISGFKDD NEANAVLDLW QRVPNDQHFV VNKLITGGFR VGVSTGLISR AIAEAFDLDI 

       190        200        210        220        230        240 
ELVVQRLMGG FEPTADNFQQ LILPANDDEQ RSKGTPYPFF LASPIDLHRL QDSKPDDWLV 

       250        260        270        280        290        300 
EWKWDGIRGQ LIHRGHGTFL WSRGEELVND SFPELISIGE ALPDGTVLDG EVICWKEEDS 

       310        320        330        340        350        360 
IPLGFDQLQR RLGRKQVGNI LKRECPVRFI AYDLLEHKGQ DIRQEPISQR QQKLLEVIRT 

       370        380        390        400        410        420 
LKHPEHWRLQ QSQHWPLKTW DELDRQRQEA RKKHAEGLML KQRTSPYLAG RKRGSWWKYK 

       430        440        450        460        470        480 
LDPMNLDAVL LYAQAGRGRR ANLFTDYTFG LWNNSETPEL VTFAKAYSGL DNAEILELDR 

       490        500        510        520        530        540 
WIRKNTLQRF GPTRSVRPEQ VFELGFEGIH PSKRHKAGVA VRFPRILRWR KDKTAQEGNC 

       550 
LSDAKQLMND QREA 

« Hide

References

[1]"Complete sequence of Synechococcus sp. CC9902."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Martinez M., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P.
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CC9902.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000097 Genomic DNA. Translation: ABB26004.1.
RefSeqYP_377048.1. NC_007513.1.

3D structure databases

ProteinModelPortalQ3AY23.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING316279.Syncc9902_1040.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABB26004; ABB26004; Syncc9902_1040.
GeneID3743195.
KEGGsye:Syncc9902_1040.
PATRIC23799393. VBISynSp76179_1158.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMAKSASTHN.
OrthoDBEOG6Q8HXT.

Enzyme and pathway databases

BioCycSSP316279:GJCI-1050-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ3AY23_SYNS9
AccessionPrimary (citable) accession number: Q3AY23
Entry history
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: May 14, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)