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Q3AY23

- Q3AY23_SYNS9

UniProt

Q3AY23 - Q3AY23_SYNS9

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Protein
Submitted name: Putative ATP-dependent DNA ligase
Gene
Syncc9902_1040
Organism
Synechococcus sp. (strain CC9902)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSSP316279:GJCI-1050-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Syncc9902_1040Imported
OrganismiSynechococcus sp. (strain CC9902)Imported
Taxonomic identifieri316279 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000002712: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi316279.Syncc9902_1040.

Structurei

3D structure databases

ProteinModelPortaliQ3AY23.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiKSASTHN.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3AY23-1 [UniParc]FASTAAdd to Basket

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MQAFQALFQQ LDQVTGTRAK VGLLVEHFRS VPAADAAWAL VLLLGKRRRR    50
LITGRRLRTI LEQRGGIPEW LVAECHGQVG DSAETITLLW PAVSTKIGLV 100
ESNLPTLPVD QPLHWWMDTL LPTISGFKDD NEANAVLDLW QRVPNDQHFV 150
VNKLITGGFR VGVSTGLISR AIAEAFDLDI ELVVQRLMGG FEPTADNFQQ 200
LILPANDDEQ RSKGTPYPFF LASPIDLHRL QDSKPDDWLV EWKWDGIRGQ 250
LIHRGHGTFL WSRGEELVND SFPELISIGE ALPDGTVLDG EVICWKEEDS 300
IPLGFDQLQR RLGRKQVGNI LKRECPVRFI AYDLLEHKGQ DIRQEPISQR 350
QQKLLEVIRT LKHPEHWRLQ QSQHWPLKTW DELDRQRQEA RKKHAEGLML 400
KQRTSPYLAG RKRGSWWKYK LDPMNLDAVL LYAQAGRGRR ANLFTDYTFG 450
LWNNSETPEL VTFAKAYSGL DNAEILELDR WIRKNTLQRF GPTRSVRPEQ 500
VFELGFEGIH PSKRHKAGVA VRFPRILRWR KDKTAQEGNC LSDAKQLMND 550
QREA 554
Length:554
Mass (Da):63,671
Last modified:November 22, 2005 - v1
Checksum:i35EAC6B726C471C5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000097 Genomic DNA. Translation: ABB26004.1.
RefSeqiWP_011359837.1. NC_007513.1.
YP_377048.1. NC_007513.1.

Genome annotation databases

EnsemblBacteriaiABB26004; ABB26004; Syncc9902_1040.
GeneIDi3743195.
KEGGisye:Syncc9902_1040.
PATRICi23799393. VBISynSp76179_1158.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000097 Genomic DNA. Translation: ABB26004.1 .
RefSeqi WP_011359837.1. NC_007513.1.
YP_377048.1. NC_007513.1.

3D structure databases

ProteinModelPortali Q3AY23.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 316279.Syncc9902_1040.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABB26004 ; ABB26004 ; Syncc9902_1040 .
GeneIDi 3743195.
KEGGi sye:Syncc9902_1040.
PATRICi 23799393. VBISynSp76179_1158.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi KSASTHN.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci SSP316279:GJCI-1050-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Synechococcus sp. CC9902."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Martinez M., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P.
    Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CC9902.

Entry informationi

Entry nameiQ3AY23_SYNS9
AccessioniPrimary (citable) accession number: Q3AY23
Entry historyi
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: September 3, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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