Q3AXV6 (Q3AXV6_SYNS9) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Diaminopimelate epimerase EMBL ABB26071.1
EC=5.1.1.7 EMBL ABB26071.1

Gene names

Ordered Locus Names:

Syncc9902_1107

Organism

Synechococcus sp. (strain CC9902) [Complete proteome] [HAMAP] EMBL ABB26071.1

Taxonomic identifier

316279 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	355 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	LL-2,6-diaminoheptanedioate = meso-diaminoheptanedioate. SAAS SAAS018510
Pathway	Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; DL-2,6-diaminopimelate from LL-2,6-diaminopimelate: step 1/1. SAAS SAAS018510
Subcellular location	Cytoplasm By similarity SAAS SAAS018510.

Ontologies

Keywords
Biological process	Amino-acid biosynthesis Lysine biosynthesis SAAS SAAS018510
Cellular component	Cytoplasm SAAS SAAS018510
Molecular function	Isomerase SAAS SAAS018510 EMBL ABB26071.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	lysine biosynthetic process via diaminopimelate Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	diaminopimelate epimerase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3AXV6 [UniParc]. Last modified November 22, 2005. Version 1. Checksum: 4AA9FF69D9041E67	FASTA	355	37,795
	10 20 30 40 50 60 MLQFSKYQGL GNDFLILEGR QGQLDFAVAE PDPNWVRRIC DRRFGVGGDG VILALPPQAD 70 80 90 100 110 120 GDLRMRIFNA DGTEAEMCGN GIRCLARYLA DTDGEAPGCR WAIETPAGMI RPELMTNGQL 130 140 150 160 170 180 RVDMGAPFLE SASIPTTLEP LAGLPRGALE IDGVPLNVAS VGMGNPHVVV PVEDLSRIPF 190 200 210 220 230 240 EVWGAALEVH PVFPAKTNVH FLKVHARDRL EIRVWERGAG PTLACGTGAC ATLVAAVLLD 250 260 270 280 290 300 LADEQAEVML PGGPLLISWP GRSGSVLMTG PAEAVFDGVI TPELVPAPSP SESMVQVPDV 310 320 330 340 350 NTPVETPSPA SLEDEAAALA KVQAFLNDTS LDSMLNLASD SLEQRTRSRF ERGGS

References

[1]

"Complete sequence of Synechococcus sp. CC9902." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Martinez M., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P. Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000097 Genomic DNA. Translation: ABB26071.1.
RefSeq	YP_377115.1. NC_007513.1.
3D structure databases
ProteinModelPortal	Q3AXV6.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3AXV6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3743321.
GenomeReviews	Gene locus Syncc9902_1107 in contig CP000097_GR.
KEGG	sye:Syncc9902_1107.
PATRIC	23799535. VBISynSp76179_1229.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0253.
HOGENOM	HBG399442.
OMA	FMTGPAT.
PhylomeDB	Q3AXV6.
ProtClustDB	CLSK922416.
Enzyme and pathway databases
BioCyc	SSP1131-1:SYNCC9902_1107-MONOMER.
Family and domain databases
HAMAP	MF_00197. DAP_epimerase. [Tree]
InterPro	IPR018510. DAP_epimerase_AS. IPR001653. DAP_epimerase_DapF. [Graphical view]
KO	K01778.
Pfam	PF01678. DAP_epimerase. 2 hits. [Graphical view]
TIGRFAMs	TIGR00652. DapF. 1 hit.
PROSITE	PS01326. DAP_EPIMERASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3AXV6_SYNS9

Accession

Primary (citable) accession number: Q3AXV6

Entry history

Integrated into UniProtKB/TrEMBL:	November 22, 2005
Last sequence update:	November 22, 2005
Last modified:	December 14, 2011
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)