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Q3AW62 (Q3AW62_SYNS9) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Alanine racemase HAMAP MF_01201
EC=5.1.1.1 HAMAP MF_01201
Gene names
Name:alr HAMAP MF_01201
Ordered Locus Names:Syncc9902_1986
OrganismSynechococcus sp. (strain CC9902) [Complete proteome] [HAMAP] EMBL ABB26944.1
Taxonomic identifier316279 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length375 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Provides the D-alanine required for cell wall biosynthesis By similarity. HAMAP MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP MF_01201 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP MF_01201 SAAS SAAS009006

Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP MF_01201

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site411Proton acceptor; specific for D-alanine By similarity HAMAP MF_01201
Active site2681Proton acceptor; specific for L-alanine By similarity HAMAP MF_01201

Amino acid modifications

Modified residue411N6-(pyridoxal phosphate)lysine By similarity HAMAP MF_01201

Sequences

Sequence LengthMass (Da)Tools
Q3AW62 [UniParc].

Last modified November 22, 2005. Version 1.
Checksum: 841EDCE21E640908

FASTA37540,592
        10         20         30         40         50         60 
MSDQNPRQRA WVEVSPAAIK ANASALCQHL TPGTELMAVV KADGYGHGAV SVANAALDGG 

        70         80         90        100        110        120 
AASLGVATLQ EGLELRRAGL KAPILLLSNL CDPEDLRTCL EWQLMPTLSS LADAKLCHAL 

       130        140        150        160        170        180 
AEDSGRRFKV QLKIDTGMSR LGCALDDGAE TTQAIQHLKN LELKGIYSHL ACADDRSTTV 

       190        200        210        220        230        240 
TQQQRQRFQS VIETLPQRGV GLCRHLANSA GTLLEPNLHY DLVRVGLALY GHAPADHLRD 

       250        260        270        280        290        300 
IVPLRSALSV RAKVTLIREI KAGTGVSYGH QYISPNARRL AVVAIGYADG VLRSLSGQID 

       310        320        330        340        350        360 
VLHRDKRLPQ VGAITMDQLL IDATDATDLH PGSIVTLLGR DQSVEITPQS WSDRCQSIPW 

       370 
EILCGFKHRL PRVEV

« Hide

References

[1]"Complete sequence of Synechococcus sp. CC9902."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Martinez M., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P.
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000097 Genomic DNA. Translation: ABB26944.1.
RefSeqYP_377987.1. NC_007513.1.

3D structure databases

ProteinModelPortalQ3AW62.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ3AW62.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3741831.
GenomeReviewsGene locus Syncc9902_1986 in contig CP000097_GR.
KEGGsye:Syncc9902_1986.
PATRIC23801513. VBISynSp76179_2192.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHBG712172.
OMATRKEDAN.
PhylomeDBQ3AW62.
ProtClustDBPRK00053.

Enzyme and pathway databases

BioCycSSP1131-1:SYNCC9902_1986-MONOMER.

Family and domain databases

HAMAPMF_01201. Ala_racemase.
[Tree]
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
Gene3DG3DSA:2.40.37.10. Ala_racemase/Decarboxylase_C. 1 hit.
KOK01775.
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. Alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ3AW62_SYNS9
AccessionPrimary (citable) accession number: Q3AW62
Entry history
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: January 25, 2012
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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