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Q3AVF9 (GLGA_SYNS9) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glycogen synthase
EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:Syncc9902_1331
OrganismSynechococcus sp. (strain CC9902) [Complete proteome] [HAMAP]
Taxonomic identifier316279 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length513 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose. HAMAP MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionstarch synthase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 513513Glycogen synthase HAMAP MF_00484
PRO_0000241801

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q3AVF9 [UniParc].

Last modified November 22, 2005. Version 1.
Checksum: 64754A05960EE1E3

FASTA51357,588
        10         20         30         40         50         60 
MRILFAAAEC APMIKVGGMG DVVGSLPPAL AKLGHDVRLI MPGYSQLWSK LQIPDEPIWR 

        70         80         90        100        110        120 
AQTMGTEFAV YEAKHPTNGM TIYLVGHPVF DPERIYGGED EDWRFTFFAS AAAEFSWNVW 

       130        140        150        160        170        180 
KPQVLHCHDW HTGMIPVWMH QDPEISTVFT IHNLKYQGPW RWKLDRITWC PWYMQGDHTM 

       190        200        210        220        230        240 
AAALINADRV NAVSPTYAQE IRTAEYGENL HGLLNFVSGK LRGILNGIDL EAWDPATDKA 

       250        260        270        280        290        300 
LPANYSAADL TGKAVCKQVL QERMGLEVRD DAFLLGMVTR LVDQKGVDLL LQVADRLLSY 

       310        320        330        340        350        360 
TDSQIVVLGT GDRGLESGLW QLASRYPGKC AVFLTYDDDL SRLIYAGSDA FLMPSRFEPC 

       370        380        390        400        410        420 
GISQLYAMRY GSVPVVRNVG GLVDTVPPHD PNADRGTGFC FDRFEPVDFY TALVRAWEAY 

       430        440        450        460        470        480 
RHRSSWQDLQ KRGMTEDYSW DRSAVEYDLM YKDVCGIKEP TPDAALLEQF SRGQDADPSR 

       490        500        510 
ADQIDVEPSS SSSAPMTPPG RNPLNRLFGR RSG

« Hide

References

[1]"Complete sequence of Synechococcus sp. CC9902."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Martinez M., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P.
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CC9902.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000097 Genomic DNA. Translation: ABB26295.1.
RefSeqYP_377339.1. NC_007513.1.

3D structure databases

ProteinModelPortalQ3AVF9.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ3AVF9.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3743155.
GenomeReviewsGene locus Syncc9902_1331 in contig CP000097_GR.
KEGGsye:Syncc9902_1331.
PATRIC23800035. VBISynSp76179_1477.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHBG596384.
OMAPIVHEIG.
PhylomeDBQ3AVF9.
ProtClustDBPRK00654.

Enzyme and pathway databases

BioCycSSP1131-1:SYNCC9902_1331-MONOMER.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
[Tree]
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
KOK00703.
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. GlgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_SYNS9
AccessionPrimary (citable) accession number: Q3AVF9
Entry history
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: November 22, 2005
Last modified: January 25, 2012
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

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