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Q3AVF9

- GLGA_SYNS9

UniProt

Q3AVF9 - GLGA_SYNS9

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Protein

Glycogen synthase

Gene

glgA

Organism
Synechococcus sp. (strain CC9902)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciSSP316279:GJCI-1345-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:Syncc9902_1331
OrganismiSynechococcus sp. (strain CC9902)
Taxonomic identifieri316279 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000002712: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 513513Glycogen synthasePRO_0000241801Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi316279.Syncc9902_1331.

Structurei

3D structure databases

ProteinModelPortaliQ3AVF9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiPYHDESQ.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3AVF9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRILFAAAEC APMIKVGGMG DVVGSLPPAL AKLGHDVRLI MPGYSQLWSK
60 70 80 90 100
LQIPDEPIWR AQTMGTEFAV YEAKHPTNGM TIYLVGHPVF DPERIYGGED
110 120 130 140 150
EDWRFTFFAS AAAEFSWNVW KPQVLHCHDW HTGMIPVWMH QDPEISTVFT
160 170 180 190 200
IHNLKYQGPW RWKLDRITWC PWYMQGDHTM AAALINADRV NAVSPTYAQE
210 220 230 240 250
IRTAEYGENL HGLLNFVSGK LRGILNGIDL EAWDPATDKA LPANYSAADL
260 270 280 290 300
TGKAVCKQVL QERMGLEVRD DAFLLGMVTR LVDQKGVDLL LQVADRLLSY
310 320 330 340 350
TDSQIVVLGT GDRGLESGLW QLASRYPGKC AVFLTYDDDL SRLIYAGSDA
360 370 380 390 400
FLMPSRFEPC GISQLYAMRY GSVPVVRNVG GLVDTVPPHD PNADRGTGFC
410 420 430 440 450
FDRFEPVDFY TALVRAWEAY RHRSSWQDLQ KRGMTEDYSW DRSAVEYDLM
460 470 480 490 500
YKDVCGIKEP TPDAALLEQF SRGQDADPSR ADQIDVEPSS SSSAPMTPPG
510
RNPLNRLFGR RSG
Length:513
Mass (Da):57,588
Last modified:November 22, 2005 - v1
Checksum:i64754A05960EE1E3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000097 Genomic DNA. Translation: ABB26295.1.
RefSeqiWP_011360118.1. NC_007513.1.
YP_377339.1. NC_007513.1.

Genome annotation databases

EnsemblBacteriaiABB26295; ABB26295; Syncc9902_1331.
GeneIDi3743155.
KEGGisye:Syncc9902_1331.
PATRICi23800035. VBISynSp76179_1477.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000097 Genomic DNA. Translation: ABB26295.1 .
RefSeqi WP_011360118.1. NC_007513.1.
YP_377339.1. NC_007513.1.

3D structure databases

ProteinModelPortali Q3AVF9.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 316279.Syncc9902_1331.

Protein family/group databases

CAZyi GT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABB26295 ; ABB26295 ; Syncc9902_1331 .
GeneIDi 3743155.
KEGGi sye:Syncc9902_1331.
PATRICi 23800035. VBISynSp76179_1477.

Phylogenomic databases

eggNOGi COG0297.
HOGENOMi HOG000294940.
KOi K00703.
OMAi PYHDESQ.
OrthoDBi EOG6JTC6Z.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci SSP316279:GJCI-1345-MONOMER.

Family and domain databases

HAMAPi MF_00484. Glycogen_synth.
InterProi IPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view ]
Pfami PF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02095. glgA. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Synechococcus sp. CC9902."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Martinez M., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P.
    Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CC9902.

Entry informationi

Entry nameiGLGA_SYNS9
AccessioniPrimary (citable) accession number: Q3AVF9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: November 22, 2005
Last modified: October 1, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3