Q3AP53 (Q3AP53_CHLCH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-dehydro-3-deoxyphosphooctonate aldolase EMBL ABB29222.1
EC=2.5.1.55 EMBL ABB29222.1

Gene names

Ordered Locus Names:

Cag_1974

Organism

Chlorobium chlorochromatii (strain CaD3) [Complete proteome] [HAMAP]

Taxonomic identifier

340177 [NCBI]

Taxonomic lineage

Bacteria › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chlorobium/Pelodictyon group › Chlorobium

Protein attributes

Sequence length	277 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Phosphoenolpyruvate + D-arabinose 5-phosphate + H2O = 2-dehydro-3-deoxy-D-octonate 8-phosphate + phosphate. SAAS SAAS006269
Pathway	Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis. SAAS SAAS006269 Carbohydrate biosynthesis; 3-deoxy-D-manno-octulosonate biosynthesis; 3-deoxy-D-manno-octulosonate from D-ribulose 5-phosphate: step 2/3. SAAS SAAS006269
Subcellular location	Cytoplasm By similarity SAAS SAAS006269.

Ontologies

Keywords
Biological process	Lipopolysaccharide biosynthesis SAAS SAAS006269
Cellular component	Cytoplasm SAAS SAAS006269
Molecular function	Transferase SAAS SAAS006269 EMBL ABB29222.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	lipopolysaccharide biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	3-deoxy-8-phosphooctulonate synthase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3AP53 [UniParc]. Last modified November 22, 2005. Version 1. Checksum: F6177C34F6F25329	FASTA	277	29,962
	10 20 30 40 50 60 MQQKFSIGSI TVPDCELPLL IAGPCVIESR AMAFEIADEL QRISQAEGVR FIFKGSYRKA 70 80 90 100 110 120 NRTSAASFTG IGDEDALTIL ADIRQKYGMP VLTDVHESAE VALASRYVDV LQIPAFLCRQ 130 140 150 160 170 180 TELLVAAGES GLAVNIKKGQ FMAPDDMRLA AAKVARTGNN RILLTERGSS FGYHNLVVDF 190 200 210 220 230 240 RGIAKMAESG YPVLYDATHS LQLPGAGQGM SGGEREYMLP LARAAVATGV DGLFCEIHPN 250 260 270 PEKALSDAAT QIPLAEFGVI IHQLLHLYRC VQPLLSH

References

[1]

"Complete sequence of Chlorobium chlorochromatii CaD3." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Bryant D., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P. Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CaD3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000108 Genomic DNA. Translation: ABB29222.1.
RefSeq	YP_380265.1. NC_007514.1.
3D structure databases
ProteinModelPortal	Q3AP53.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3AP53.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3747352.
GenomeReviews	Gene locus Cag_1974 in contig CP000108_GR.
KEGG	cch:Cag_1974.
PATRIC	21371728. VBIChlChl46571_2057.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2877.
HOGENOM	HBG575990.
OMA	CAKLNIP.
PhylomeDB	Q3AP53.
ProtClustDB	PRK05198.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR006218. DAHP1/KDSA. IPR006269. KDO8P_synthase. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K01627.
PANTHER	PTHR21057:SF2. KDO8P_synthase. 1 hit.
Pfam	PF00793. DAHP_synth_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR01362. KDO8P_synth. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q3AP53_CHLCH

Accession

Primary (citable) accession number: Q3AP53

Entry history

Integrated into UniProtKB/TrEMBL:	November 22, 2005
Last sequence update:	November 22, 2005
Last modified:	December 14, 2011
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)