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Q3ANY2 (SYR_CHLCH) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Arginine--tRNA ligase
EC=6.1.1.19
Alternative name(s):
Arginyl-tRNA synthetase
Short name=ArgRS
Gene names
Name:argS
Ordered Locus Names:Cag_0070
OrganismChlorobium chlorochromatii (strain CaD3) [Complete proteome] [HAMAP]
Taxonomic identifier340177 [NCBI]
Taxonomic lineageBacteria › Chlorobi › Chlorobia › Chlorobiales › Chlorobiaceae › Chlorobium/Pelodictyon group › Chlorobium ›

Protein attributes

Sequence length552 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg). HAMAP-Rule MF_00123

Subunit structure

Monomer By similarity.

Subcellular location

Cytoplasm By similarity.

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family.

Ontologies

Keywords
   Biological processProtein biosynthesis
   Cellular componentCytoplasm
   LigandATP-binding
Nucleotide-binding
   Molecular functionAminoacyl-tRNA synthetase
Ligase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processarginyl-tRNA aminoacylation

Inferred from electronic annotation. Source: HAMAP

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionATP binding

Inferred from electronic annotation. Source: HAMAP

arginine-tRNA ligase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 552552Arginine--tRNA ligase HAMAP-Rule MF_00123
PRO_0000242007

Regions

Motif123 – 13311"HIGH" region HAMAP-Rule MF_00123

Sequences

Sequence LengthMass (Da)Tools
Q3ANY2 [UniParc].

Last modified November 22, 2005. Version 1.
Checksum: A40A02102F45CA37

FASTA55261,625
        10         20         30         40         50         60 
MIDFFRSAIA AALASAQLNT AKPIQLEQPA DKKFGDFSTN IAMLAAKECG KKPRDLAQEI 

        70         80         90        100        110        120 
INHLAFPPDT VAKIEIAGAG FINFYLTPRF IMRSVEQVLR DGEKFGQSTE GNGKKAIVEY 

       130        140        150        160        170        180 
VSANPTGPLT IGRGRGGVVG DCIANLLATQ GYEVTREYYF NDAGRQMQIL GASVRFRYLE 

       190        200        210        220        230        240 
LCGNTIEFPE DHYQGDYIRD IAATLYEQHG NALEKSEELE PFKKAAEELI FKSIKATLER 

       250        260        270        280        290        300 
LNIRHDSFFN EHKLYLANNN SPSANTAVIQ SLSSSNFIDD YDGATWFLTT KLGQEKDKVL 

       310        320        330        340        350        360 
IKSTGEPSYR LPDIAYHVNK FQRGFDLMVN VFGADHIDEY PDVLEALKIL GYDTTKVHVA 

       370        380        390        400        410        420 
INQFVTTTVN GQTVKMSTRK GNADLLDDLI ADVGADATRL FFITRSKDSH LNFDVELAKR 

       430        440        450        460        470        480 
QSKENPVFYL QYAHARICSL LRLAKQEVGF DADTYGFADV LQVLDGAAEV QLGFALLNFP 

       490        500        510        520        530        540 
AMIQSSLRLL EPQKMVEYLH ALAEHFHRFY QESPILKAEP EVRTARLLLS VATRQVLRNG 

       550 
FTILGISAPE AM

« Hide

References

[1]"Complete sequence of Chlorobium chlorochromatii CaD3."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Bryant D., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P.
Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CaD3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000108 Genomic DNA. Translation: ABB27349.1.
RefSeqYP_378392.1. NC_007514.1.

3D structure databases

ProteinModelPortalQ3ANY2.
ModBaseSearch...

Protein-protein interaction databases

STRING340177.Cag_0070.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABB27349; ABB27349; Cag_0070.
GeneID3746404.
KEGGcch:Cag_0070.
PATRIC21367669. VBIChlChl46571_0073.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0018.
HOGENOMHOG000247214.
KOK01887.
OMAHTSANPN.
ProtClustDBPRK01611.

Enzyme and pathway databases

BioCycCCHL340177:GHBW-71-MONOMER.

Family and domain databases

Gene3D3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPMF_00123. Arg_tRNA_synth.
InterProIPR001278. Arg-tRNA-ligase_Ia.
IPR015945. Arg-tRNA-synth_Ia_core.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
PANTHERPTHR11956. PTHR11956. 1 hit.
PfamPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSPR01038. TRNASYNTHARG.
SMARTSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMSSF55190. Arg-tRNA-synth_Ic_N. 1 hit.
SSF47323. tRNAsyn_1a_bind. 1 hit.
TIGRFAMsTIGR00456. argS. 1 hit.
PROSITEPS00178. AA_TRNA_LIGASE_I. False negative.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSYR_CHLCH
AccessionPrimary (citable) accession number: Q3ANY2
Entry history
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: November 22, 2005
Last modified: May 1, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Aminoacyl-tRNA synthetases

List of aminoacyl-tRNA synthetase entries

SIMILARITY comments

Index of protein domains and families

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