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Q3ANB7 (Q3ANB7_SYNSC) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
2-dehydro-3-deoxyphosphooctonate aldolase 1 HAMAP MF_00056
EC=2.5.1.55 HAMAP MF_00056
Alternative name(s):
3-deoxy-D-manno-octulosonic acid 8-phosphate synthase 1 HAMAP MF_00056
KDO-8-phosphate synthase 1 HAMAP MF_00056
Phospho-2-dehydro-3-deoxyoctonate aldolase 1 HAMAP MF_00056
Gene names
Name:kdsA1 HAMAP MF_00056
Ordered Locus Names:Syncc9605_0139
OrganismSynechococcus sp. (strain CC9605) [Complete proteome] [HAMAP]
Taxonomic identifier110662 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length282 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Phosphoenolpyruvate + D-arabinose 5-phosphate + H2O = 2-dehydro-3-deoxy-D-octonate 8-phosphate + phosphate. HAMAP MF_00056 SAAS SAAS006269

Pathway

Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis. HAMAP MF_00056 SAAS SAAS006269

Carbohydrate biosynthesis; 3-deoxy-D-manno-octulosonate biosynthesis; 3-deoxy-D-manno-octulosonate from D-ribulose 5-phosphate: step 2/3. HAMAP MF_00056 SAAS SAAS006269

Subcellular location

Cytoplasm By similarity HAMAP MF_00056 SAAS SAAS006269.

Sequence similarities

Belongs to the KdsA family. HAMAP MF_00056

Sequences

Sequence LengthMass (Da)Tools
Q3ANB7 [UniParc].

Last modified November 22, 2005. Version 1.
Checksum: 8D7F58FAA518785B

FASTA28230,585
        10         20         30         40         50         60 
MAHQIQLGDI TFANDRPFAL LGGVNVLEDL DFALRCAGHY KNVCGRLNIP LVFKASYDKA 

        70         80         90        100        110        120 
NRSSIHSFRG PGLNEGLQIL QAVKDTHGIP VITDVHSPEE AAAAAKVADI IQLPAFLARQ 

       130        140        150        160        170        180 
TDLVRAMAET GAMINVKKPQ FLSPEQMRNI VDKFRECGNE NLLLCERGTN FGYDNLVVDM 

       190        200        210        220        230        240 
LGFGVMKRTC DDLPLIFDVT HALQCRDPGG AASGGRRSQV VDLARSGMAV GLAGLFLEAH 

       250        260        270        280 
PDPARARCDG PSALPLDQLE PFLTQVKAID DLVKAMPDLQ IN

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References

[1]"Complete sequence of Synechococcus sp. CC9605."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Schmutz J., Martinez M., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P.
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CC9605.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000110 Genomic DNA. Translation: ABB33915.1.
RefSeqYP_380470.1. NC_007516.1.

3D structure databases

ProteinModelPortalQ3ANB7.
SMRQ3ANB7. Positions 5-279.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ3ANB7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3737324.
GenomeReviewsGene locus Syncc9605_0139 in contig CP000110_GR.
KEGGsyd:Syncc9605_0139.
NMPDRfig|110662.3.peg.629.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2877.
HOGENOMHBG575990.
OMAQLILCDR.
PhylomeDBQ3ANB7.
ProtClustDBPRK12457.

Enzyme and pathway databases

BioCycSSP1131:SYNCC9605_0139-MONOMER.

Family and domain databases

HAMAPMF_00056. KDO8P_synth.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR006218. DAHP1/KDSA.
IPR006269. KDO8P_synthase.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01627.
PANTHERPTHR21057:SF2. KDO8P_synthase. 1 hit.
PfamPF00793. DAHP_synth_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR01362. KDO8P_synth. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ3ANB7_SYNSC
AccessionPrimary (citable) accession number: Q3ANB7
Entry history
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: January 25, 2012
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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