SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q3AKV6

- GLGB_SYNSC

UniProt

Q3AKV6 - GLGB_SYNSC

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
1,4-alpha-glucan branching enzyme GlgB
Gene
glgB, Syncc9605_1018
Organism
Synechococcus sp. (strain CC9605)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei431 – 4311Nucleophile By similarity
Active sitei484 – 4841Proton donor By similarity

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciSSP110662:GJ7R-1053-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgB (EC:2.4.1.18)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase
Alpha-(1->4)-glucan branching enzyme
Glycogen branching enzyme
Short name:
BE
Gene namesi
Name:glgB
Ordered Locus Names:Syncc9605_1018
OrganismiSynechococcus sp. (strain CC9605)
Taxonomic identifieri110662 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000002711: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7657651,4-alpha-glucan branching enzyme GlgBUniRule annotation
PRO_0000260706Add
BLAST

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi110662.Syncc9605_1018.

Structurei

3D structure databases

ProteinModelPortaliQ3AKV6.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiALEWIEH.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3AKV6-1 [UniParc]FASTAAdd to Basket

« Hide

MGVAAVLDWL VQDGERLASC RHDHPFAVLG PQASDQGWTV RMWMPEAQSV    50
SLLQAGEEIA MTTPNHPWVF EAQVSQDPGC HYRVKVERGG IVHEQHDPWA 100
FRGEWMGEMD RHLFAEGNHH HIWQKMGAHL TERDGITGVM FCLWAPNALS 150
VSVIGDLNSW DGRHHPMQQR VGGIWELFVP GLEEGHLYKY EIRTQDGHCY 200
QKADPYGFQH EVRPDNSSVV ARLNGFQWSD QTWMQKRDSS NALDQPISVY 250
EMHLGSWIHA SADEPWIQPD GTPRPPVPAA DMKPGARLLT YAELADRLIP 300
YVKDRGFTHI EVMPITEHPF DGSWGYQVTG WYAPTSRYGT PDEFRAFVDR 350
CHAEGIGVII DWVPGHFPKD AHGLAFFDGA HLYEHSDPRI GEHKEWGTLI 400
FNYSRNEVRN FLVANLIFWF EQFHIDGIRV DAVASMLYRD YLRPDGEWLP 450
NESGGRENTE AVRFLQQANH VLFQHFPGAL SIAEESTTWP MVTQPTDSGG 500
LGFNLKWNMG WMHDMLDYFE LDPWFRQFHQ NNITFSIWYT YTENFMLALS 550
HDEVVHGKSH LMHKMPGDDW QKYANTRALL SYMWTHPGKK TIFMGMEFGQ 600
RAEWNVWGDL QWDLLNYEPH KGIQRLVDDL NVLYKAEPAL WRDDFDQFGF 650
QWIDCNDNRH SVISFMRRES ASGTWLVVVA NFTPQSHSHY RVGVPLSGFY 700
EEIFNSDAAK YGGSNLGNMG GKPTDEWGIH GYENSLDLCL PPLSLMVFKH 750
DPKRSLNSSE PDNIV 765
Length:765
Mass (Da):88,028
Last modified:November 22, 2005 - v1
Checksum:i39173F2F383AB68B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000110 Genomic DNA. Translation: ABB34776.1.
RefSeqiWP_011364000.1. NC_007516.1.
YP_381331.1. NC_007516.1.

Genome annotation databases

EnsemblBacteriaiABB34776; ABB34776; Syncc9605_1018.
GeneIDi3735265.
KEGGisyd:Syncc9605_1018.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000110 Genomic DNA. Translation: ABB34776.1 .
RefSeqi WP_011364000.1. NC_007516.1.
YP_381331.1. NC_007516.1.

3D structure databases

ProteinModelPortali Q3AKV6.
ModBasei Search...

Protein-protein interaction databases

STRINGi 110662.Syncc9605_1018.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABB34776 ; ABB34776 ; Syncc9605_1018 .
GeneIDi 3735265.
KEGGi syd:Syncc9605_1018.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi ALEWIEH.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci SSP110662:GJ7R-1053-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Synechococcus sp. CC9605."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Schmutz J., Martinez M., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P.
    Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CC9605.

Entry informationi

Entry nameiGLGB_SYNSC
AccessioniPrimary (citable) accession number: Q3AKV6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: November 22, 2005
Last modified: September 3, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi