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Protein

Transport permease protein

Gene

Pcar_0097

Organism
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. ATPase activity, coupled to transmembrane movement of substances Source: InterPro
  2. ATP binding Source: InterPro
Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciPCAR338963:GKDU-102-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Transport permease proteinUniRule annotation
Gene namesi
Ordered Locus Names:Pcar_0097Imported
OrganismiPelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)Imported
Taxonomic identifieri338963 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesPelobacteraceaePelobacter
ProteomesiUP000002534: Chromosome

Subcellular locationi

Cell inner membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei36 – 5419HelicalUniRule annotationAdd
BLAST
Transmembranei66 – 8520HelicalUniRule annotationAdd
BLAST
Transmembranei114 – 13926HelicalUniRule annotationAdd
BLAST
Transmembranei151 – 17222HelicalUniRule annotationAdd
BLAST
Transmembranei184 – 20623HelicalUniRule annotationAdd
BLAST
Transmembranei234 – 25623HelicalUniRule annotationAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membraneUniRule annotation, Membrane

Interactioni

Protein-protein interaction databases

STRINGi338963.Pcar_0097.

Family & Domainsi

Sequence similaritiesi

Belongs to the ABC-2 integral membrane protein family.UniRule annotation
Contains 1 ABC transmembrane type-2 domain.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotation

Phylogenomic databases

eggNOGiCOG0842.
HOGENOMiHOG000252769.
KOiK01992.
OMAiWNRYIEE.
OrthoDBiEOG66B41P.

Family and domain databases

InterProiIPR013525. ABC_2_trans.
IPR000412. ABC_2_transport.
[Graphical view]
PANTHERiPTHR30413. PTHR30413. 1 hit.
PfamiPF01061. ABC2_membrane. 1 hit.
[Graphical view]
PIRSFiPIRSF006648. DrrB. 1 hit.
PRINTSiPR00164. ABC2TRNSPORT.
PROSITEiPS51012. ABC_TM2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3A8D2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MMERFRQPEK FVAWLPFATL LQKEVRRFLR VSFQTLLAPI VTASLYLFVF
60 70 80 90 100
GATLGERISV LEGFSYAQFV IPGLILMGVI TNSFANTSSS LFISRYLGNI
110 120 130 140 150
VDLLVTPISA PQFILAYTLA AMLRGLLVGG AVLVISTFFA DLPWVHPYAT
160 170 180 190 200
LAMAALASFL FAQFGLIAAI HANTFDALSM FNNFLIVPLI YLGGVFYPVS
210 220 230 240 250
ILPPFWEHLS RFNPMLYLID GFRQTILGVG DVPLMVSFSA TFAMAFVLFC
260
WAALLIGRGY KLRL
Length:264
Mass (Da):29,338
Last modified:November 22, 2005 - v1
Checksum:iE51ABE2FAD0E0DCE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000142 Genomic DNA. Translation: ABA87360.1.
RefSeqiYP_006715741.1. NC_007498.2.

Genome annotation databases

EnsemblBacteriaiABA87360; ABA87360; Pcar_0097.
GeneIDi3722892.
KEGGipca:Pcar_0097.
PATRICi22886040. VBIPelCar86875_0105.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000142 Genomic DNA. Translation: ABA87360.1.
RefSeqiYP_006715741.1. NC_007498.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi338963.Pcar_0097.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABA87360; ABA87360; Pcar_0097.
GeneIDi3722892.
KEGGipca:Pcar_0097.
PATRICi22886040. VBIPelCar86875_0105.

Phylogenomic databases

eggNOGiCOG0842.
HOGENOMiHOG000252769.
KOiK01992.
OMAiWNRYIEE.
OrthoDBiEOG66B41P.

Enzyme and pathway databases

BioCyciPCAR338963:GKDU-102-MONOMER.

Family and domain databases

InterProiIPR013525. ABC_2_trans.
IPR000412. ABC_2_transport.
[Graphical view]
PANTHERiPTHR30413. PTHR30413. 1 hit.
PfamiPF01061. ABC2_membrane. 1 hit.
[Graphical view]
PIRSFiPIRSF006648. DrrB. 1 hit.
PRINTSiPR00164. ABC2TRNSPORT.
PROSITEiPS51012. ABC_TM2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Pelobacter carbinolicus DSM 2380."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Chertkov O., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P.
    Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 2380 / Gra Bd 1Imported.

Entry informationi

Entry nameiQ3A8D2_PELCD
AccessioniPrimary (citable) accession number: Q3A8D2
Entry historyi
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: February 4, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.