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Protein

Transport permease protein

Gene

Pcar_0097

Organism
Pelobacter carbinolicus (strain DSM 2380 / NBRC 103641 / GraBd1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Keywordsi

Biological processTransportUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Transport permease proteinUniRule annotation
Gene namesi
Ordered Locus Names:Pcar_0097Imported
OrganismiPelobacter carbinolicus (strain DSM 2380 / NBRC 103641 / GraBd1)Imported
Taxonomic identifieri338963 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesDesulfuromonadaceaePelobacter
Proteomesi
  • UP000002534 Componenti: Chromosome

Subcellular locationi

  • Cell inner membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei36 – 54HelicalUniRule annotationAdd BLAST19
Transmembranei66 – 85HelicalUniRule annotationAdd BLAST20
Transmembranei114 – 139HelicalUniRule annotationAdd BLAST26
Transmembranei151 – 172HelicalUniRule annotationAdd BLAST22
Transmembranei184 – 206HelicalUniRule annotationAdd BLAST23
Transmembranei234 – 256HelicalUniRule annotationAdd BLAST23

GO - Cellular componenti

Keywords - Cellular componenti

Cell membraneUniRule annotation, Membrane

Interactioni

Protein-protein interaction databases

STRINGi338963.Pcar_0097.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini17 – 226ABC2_membraneInterPro annotationAdd BLAST210

Sequence similaritiesi

Belongs to the ABC-2 integral membrane protein family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotation

Phylogenomic databases

eggNOGiENOG4105E3A. Bacteria.
COG0842. LUCA.
HOGENOMiHOG000252769.
KOiK01992.
OMAiRYGFFGV.
OrthoDBiPOG091H063F.

Family and domain databases

InterProiView protein in InterPro
IPR013525. ABC_2_trans.
IPR000412. ABC_2_transport.
PfamiView protein in Pfam
PF01061. ABC2_membrane. 1 hit.
PIRSFiPIRSF006648. DrrB. 1 hit.
PRINTSiPR00164. ABC2TRNSPORT.
PROSITEiView protein in PROSITE
PS51012. ABC_TM2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3A8D2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMERFRQPEK FVAWLPFATL LQKEVRRFLR VSFQTLLAPI VTASLYLFVF
60 70 80 90 100
GATLGERISV LEGFSYAQFV IPGLILMGVI TNSFANTSSS LFISRYLGNI
110 120 130 140 150
VDLLVTPISA PQFILAYTLA AMLRGLLVGG AVLVISTFFA DLPWVHPYAT
160 170 180 190 200
LAMAALASFL FAQFGLIAAI HANTFDALSM FNNFLIVPLI YLGGVFYPVS
210 220 230 240 250
ILPPFWEHLS RFNPMLYLID GFRQTILGVG DVPLMVSFSA TFAMAFVLFC
260
WAALLIGRGY KLRL
Length:264
Mass (Da):29,338
Last modified:November 22, 2005 - v1
Checksum:iE51ABE2FAD0E0DCE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000142 Genomic DNA. Translation: ABA87360.1.
RefSeqiWP_011339748.1. NC_007498.2.

Genome annotation databases

EnsemblBacteriaiABA87360; ABA87360; Pcar_0097.
KEGGipca:Pcar_0097.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ3A8D2_PELCD
AccessioniPrimary (citable) accession number: Q3A8D2
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: June 7, 2017
This is version 63 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported