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Q39YX5

- Q39YX5_GEOMG

UniProt

Q39YX5 - Q39YX5_GEOMG

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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Magnesium.UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei179 – 1791UniRule annotation
Active sitei593 – 5931UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciGMET269799:GHNY-305-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:Gmet_0304Imported
OrganismiGeobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)Imported
Taxonomic identifieri269799 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter
ProteomesiUP000007073: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGi269799.Gmet_0304.

Structurei

3D structure databases

ProteinModelPortaliQ39YX5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238647.
KOiK01595.
OMAiELSTISC.
OrthoDBiEOG6TJ7T8.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 2 hits.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q39YX5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAERELFWKA DDQAVRLNEL MTLDPALKDI PLRRDVRSLG RLLGEVIKEQ
60 70 80 90 100
AGPAAYDAEE ELRRLAISHR ALADQEEAVL DSPAEQELQE RAVRIVGTMT
110 120 130 140 150
VAETYQIVKA FGTFFELTNL AETNHRMRRR RATQLSPAAP VKPGSLLGTL
160 170 180 190 200
MRMRDGGITA EKALDLLRQV EIMPVFTAHP TEVARRVVLF KRRRIARELA
210 220 230 240 250
ELDLLPLAGD EADRRQEAIF AEITALWQTD EVRRRPQGVT DEIRMGLDHY
260 270 280 290 300
PGSLMAPLAG LYEEMAEDFR QVYGADLPDA AFPTVIRFGS WIGGDRDGNP
310 320 330 340 350
NVTVGTTRHA LESARQMILA RYLDGVEELK ELLTPSTNRV TVSPQLREAL
360 370 380 390 400
ERYVAALAGA AAETGIYPEC EPYRKFLRCV HHRLMQTRDG EDHPDAYPDA
410 420 430 440 450
GAFAADLMLV RTSLAQGEGE RLARRYVDPL LRQVETFGFH LHALDIRQHA
460 470 480 490 500
RIHARAVAEL AAGAGSCEEG VHPVPPPPSA ETTELLDTLR AVAKLKQRYS
510 520 530 540 550
PKAIRSYVIS GASSARDTLS LIWLMELCGI RVAASPDGKD PGVMPVPLFE
560 570 580 590 600
SIEDLRNAPG ICRALWCSPE YGPFLDSWGR RQEVMLGYSD SNKDGGMFTS
610 620 630 640 650
TWEIHKAHRD LQRVAQECGV RLRLFHGRGG TVGRGGGPTH RAIIAQPADG
660 670 680 690 700
FSGALKITEQ GEVINWKYSD PSLAKRNLEL MVAASLETLA RAGLVETRPE
710 720 730 740 750
PAWEEALEEM SGSAFTFYRE RITGNPDILP YFEQATPVLE FELAKIGSRP
760 770 780 790 800
ARRSRSRDIA ELRAIPWGFG WIQSRHVIPG WFGVGFALDR FAVGGEGRLE
810 820 830 840 850
FLRSMMGRFP FFFDLIRNVE LALTKVDLPL ARLYASLVTD AGIRERVFAM
860 870 880 890 900
IVEEYQRTRR MVLAVTGQAR LLEKNPALTA SLRLRNPYID PLSMIQIELL
910 920 930
RRKRAGEESD ELNYVLAATI NGIAAGLRNT G
Length:931
Mass (Da):103,902
Last modified:November 22, 2005 - v1
Checksum:iF8D5AA0FCC02E2BE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000148 Genomic DNA. Translation: ABB30549.1.
RefSeqiYP_006719268.1. NC_007517.1.

Genome annotation databases

EnsemblBacteriaiABB30549; ABB30549; Gmet_0304.
GeneIDi3739591.
KEGGigme:Gmet_0304.
PATRICi21999758. VBIGeoMet55070_0326.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000148 Genomic DNA. Translation: ABB30549.1 .
RefSeqi YP_006719268.1. NC_007517.1.

3D structure databases

ProteinModelPortali Q39YX5.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 269799.Gmet_0304.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABB30549 ; ABB30549 ; Gmet_0304 .
GeneIDi 3739591.
KEGGi gme:Gmet_0304.
PATRICi 21999758. VBIGeoMet55070_0326.

Phylogenomic databases

eggNOGi COG2352.
HOGENOMi HOG000238647.
KOi K01595.
OMAi ELSTISC.
OrthoDBi EOG6TJ7T8.

Enzyme and pathway databases

BioCyci GMET269799:GHNY-305-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 2 hits.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Geobacter metallireducens GS-15."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Chain P., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P.
    Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GS-15 / ATCC 53774 / DSM 7210Imported.

Entry informationi

Entry nameiQ39YX5_GEOMG
AccessioniPrimary (citable) accession number: Q39YX5
Entry historyi
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: October 1, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3