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Q39Y10 (RS7_GEOMG) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
30S ribosomal protein S7
Gene names
Name:rpsG
Ordered Locus Names:Gmet_0622
OrganismGeobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [Complete proteome] [HAMAP]
Taxonomic identifier269799 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter

Protein attributes

Sequence length156 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA By similarity. HAMAP-Rule MF_00480

Subunit structure

Part of the 30S ribosomal subunit. Contacts proteins S9 and S11 By similarity.

Sequence similarities

Belongs to the ribosomal protein S7P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
tRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentsmall ribosomal subunit

Inferred from electronic annotation. Source: InterPro

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

tRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 15615630S ribosomal protein S7 HAMAP-Rule MF_00480
PRO_0000226502

Sequences

Sequence LengthMass (Da)Tools
Q39Y10 [UniParc].

Last modified November 22, 2005. Version 1.
Checksum: E16FB9D41923950C

FASTA15617,750
        10         20         30         40         50         60 
MPRRREVAKR VILPDPKFND RVVAKLVNVI MVGGKKSTAE RALYGALEVV SQKTGEEAVK 

        70         80         90        100        110        120 
VLKKCLDNIK PTLEVKSRRV GGSTYQVPVE VRADRRVSLA MRWLVKYAND RSEKTVTDKL 

       130        140        150 
AGEILDVYNN RGAAVKKRED THRMAEANRA FAHYRW 

« Hide

References

[1]"Complete sequence of Geobacter metallireducens GS-15."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Chain P., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P.
Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: GS-15 / ATCC 53774 / DSM 7210.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000148 Genomic DNA. Translation: ABB30864.1.
RefSeqYP_006719586.1. NC_007517.1.

3D structure databases

ProteinModelPortalQ39Y10.
SMRQ39Y10. Positions 3-152.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269799.Gmet_0622.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABB30864; ABB30864; Gmet_0622.
GeneID3739245.
KEGGgme:Gmet_0622.
PATRIC22000414. VBIGeoMet55070_0649.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0049.
HOGENOMHOG000039067.
KOK02992.
OMAEVHRMAD.
OrthoDBEOG6P5ZKW.
ProtClustDBPRK05302.

Enzyme and pathway databases

BioCycGMET269799:GHNY-629-MONOMER.

Family and domain databases

Gene3D1.10.455.10. 1 hit.
HAMAPMF_00480_B. Ribosomal_S7_B.
InterProIPR000235. Ribosomal_S5/S7.
IPR005717. Ribosomal_S7_bac/org-type.
IPR023798. Ribosomal_S7_dom.
[Graphical view]
PANTHERPTHR11205. PTHR11205. 1 hit.
PTHR11205:SF13. PTHR11205:SF13. 1 hit.
PfamPF00177. Ribosomal_S7. 1 hit.
[Graphical view]
PIRSFPIRSF002122. RPS7p_RPS7a_RPS5e_RPS7o. 1 hit.
SUPFAMSSF47973. SSF47973. 1 hit.
TIGRFAMsTIGR01029. rpsG_bact. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRS7_GEOMG
AccessionPrimary (citable) accession number: Q39Y10
Entry history
Integrated into UniProtKB/Swiss-Prot: March 7, 2006
Last sequence update: November 22, 2005
Last modified: February 19, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries