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Q39XS5

- GLGA1_GEOMG

UniProt

Q39XS5 - GLGA1_GEOMG

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Protein

Glycogen synthase 1

Gene

glgA1

Organism
Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei18 – 181ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciGMET269799:GHNY-714-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthase 1UniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthase 1UniRule annotation
Gene namesi
Name:glgA1UniRule annotation
Ordered Locus Names:Gmet_0707
OrganismiGeobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Taxonomic identifieri269799 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter
ProteomesiUP000007073: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 502502Glycogen synthase 1PRO_0000230241Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi269799.Gmet_0707.

Structurei

3D structure databases

ProteinModelPortaliQ39XS5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiMAKRFTW.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q39XS5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKKLKILMAA SECVPFAKEG GLADVVGVLP KHLARMGHDV RVVMPRYKRV
60 70 80 90 100
DRERYGLKQL PGVLVVPMGV IGNQYCGVWE GRIPGSDVPV YFLEHEGYYD
110 120 130 140 150
RDGLYEVNNE GFLDNDNRFV FLSKAALELP KMIGFEPDLL HAHDWHTAAI
160 170 180 190 200
PVLVNTTYAA DPYVGGKATV LSVHNMQHQG NFYEGLMDVL GIGWEHFTFL
210 220 230 240 250
GLENNGEANL LKGGLYHATV LNTVSEGYAR EMQTPEYGWG LDGVVRERAA
260 270 280 290 300
DLYGILNGVD YEDWNPEVDP YIAARYSAAD LSGKKLCKRD LQRTFGLPER
310 320 330 340 350
DDVPLFGMVS RLVKQKGVDI LAEAIHRILA LDVQFVMLGA GEPWTHFYFG
360 370 380 390 400
DIKNAYPDKF NIFVGYNNPL SHQIEAGADF FLMPSAFEPC GLNQMYSLRY
410 420 430 440 450
GTLPIVRATG GLDDSVENFD EKTLVGTGFK FWSRDAGALF DTVGWAVHTW
460 470 480 490 500
YHRKDAMERL IANAMAKRFT WEDAAARYED LYGRALRKRL GEKEFARRYG

KG
Length:502
Mass (Da):56,508
Last modified:November 22, 2005 - v1
Checksum:iC21743C749EDFE6D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000148 Genomic DNA. Translation: ABB30949.1.
RefSeqiYP_006719671.1. NC_007517.1.

Genome annotation databases

EnsemblBacteriaiABB30949; ABB30949; Gmet_0707.
GeneIDi3738258.
KEGGigme:Gmet_0707.
PATRICi22000584. VBIGeoMet55070_0734.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000148 Genomic DNA. Translation: ABB30949.1 .
RefSeqi YP_006719671.1. NC_007517.1.

3D structure databases

ProteinModelPortali Q39XS5.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 269799.Gmet_0707.

Protein family/group databases

CAZyi GT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABB30949 ; ABB30949 ; Gmet_0707 .
GeneIDi 3738258.
KEGGi gme:Gmet_0707.
PATRICi 22000584. VBIGeoMet55070_0734.

Phylogenomic databases

eggNOGi COG0297.
HOGENOMi HOG000294940.
KOi K00703.
OMAi MAKRFTW.
OrthoDBi EOG6JTC6Z.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci GMET269799:GHNY-714-MONOMER.

Family and domain databases

HAMAPi MF_00484. Glycogen_synth.
InterProi IPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view ]
Pfami PF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02095. glgA. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Geobacter metallireducens GS-15."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Chain P., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P.
    Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GS-15 / ATCC 53774 / DSM 7210.

Entry informationi

Entry nameiGLGA1_GEOMG
AccessioniPrimary (citable) accession number: Q39XS5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: November 22, 2005
Last modified: November 26, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3