Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Glycogen synthase 1

Gene

glgA1

Organism
Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathway:iglycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei18 – 181ADP-glucoseUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciGMET269799:GHNY-714-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthase 1UniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthase 1UniRule annotation
Gene namesi
Name:glgA1UniRule annotation
Ordered Locus Names:Gmet_0707
OrganismiGeobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Taxonomic identifieri269799 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter
ProteomesiUP000007073 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 502502Glycogen synthase 1PRO_0000230241Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi269799.Gmet_0707.

Structurei

3D structure databases

ProteinModelPortaliQ39XS5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiVPAYLAW.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q39XS5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKLKILMAA SECVPFAKEG GLADVVGVLP KHLARMGHDV RVVMPRYKRV
60 70 80 90 100
DRERYGLKQL PGVLVVPMGV IGNQYCGVWE GRIPGSDVPV YFLEHEGYYD
110 120 130 140 150
RDGLYEVNNE GFLDNDNRFV FLSKAALELP KMIGFEPDLL HAHDWHTAAI
160 170 180 190 200
PVLVNTTYAA DPYVGGKATV LSVHNMQHQG NFYEGLMDVL GIGWEHFTFL
210 220 230 240 250
GLENNGEANL LKGGLYHATV LNTVSEGYAR EMQTPEYGWG LDGVVRERAA
260 270 280 290 300
DLYGILNGVD YEDWNPEVDP YIAARYSAAD LSGKKLCKRD LQRTFGLPER
310 320 330 340 350
DDVPLFGMVS RLVKQKGVDI LAEAIHRILA LDVQFVMLGA GEPWTHFYFG
360 370 380 390 400
DIKNAYPDKF NIFVGYNNPL SHQIEAGADF FLMPSAFEPC GLNQMYSLRY
410 420 430 440 450
GTLPIVRATG GLDDSVENFD EKTLVGTGFK FWSRDAGALF DTVGWAVHTW
460 470 480 490 500
YHRKDAMERL IANAMAKRFT WEDAAARYED LYGRALRKRL GEKEFARRYG

KG
Length:502
Mass (Da):56,508
Last modified:November 22, 2005 - v1
Checksum:iC21743C749EDFE6D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000148 Genomic DNA. Translation: ABB30949.1.
RefSeqiWP_004514099.1. NC_007517.1.

Genome annotation databases

EnsemblBacteriaiABB30949; ABB30949; Gmet_0707.
KEGGigme:Gmet_0707.
PATRICi22000584. VBIGeoMet55070_0734.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000148 Genomic DNA. Translation: ABB30949.1.
RefSeqiWP_004514099.1. NC_007517.1.

3D structure databases

ProteinModelPortaliQ39XS5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi269799.Gmet_0707.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABB30949; ABB30949; Gmet_0707.
KEGGigme:Gmet_0707.
PATRICi22000584. VBIGeoMet55070_0734.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiVPAYLAW.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciGMET269799:GHNY-714-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Geobacter metallireducens GS-15."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Chain P., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P.
    Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GS-15 / ATCC 53774 / DSM 7210.

Entry informationi

Entry nameiGLGA1_GEOMG
AccessioniPrimary (citable) accession number: Q39XS5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: November 22, 2005
Last modified: July 22, 2015
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.