Q39XS5 (GLGA1_GEOMG) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Glycogen synthase 1
EC=2.4.1.21

Alternative name(s):
Starch [bacterial glycogen] synthase 1

Gene names

Name:	glgA1
Ordered Locus Names:	Gmet_0707

Organism

Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [Complete proteome] [HAMAP]

Taxonomic identifier

269799 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Deltaproteobacteria › Desulfuromonadales › Geobacteraceae › Geobacter

Protein attributes

Sequence length	502 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose. HAMAP MF_00484
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
Biological process	Glycogen biosynthesis
Molecular function	Glycosyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	starch synthase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 502	502	Glycogen synthase 1 HAMAP MF_00484		PRO_0000230241
Sites
	Binding site	18	1	ADP-glucose By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q39XS5 [UniParc]. Last modified November 22, 2005. Version 1. Checksum: C21743C749EDFE6D	FASTA	502	56,508
	10 20 30 40 50 60 MKKLKILMAA SECVPFAKEG GLADVVGVLP KHLARMGHDV RVVMPRYKRV DRERYGLKQL 70 80 90 100 110 120 PGVLVVPMGV IGNQYCGVWE GRIPGSDVPV YFLEHEGYYD RDGLYEVNNE GFLDNDNRFV 130 140 150 160 170 180 FLSKAALELP KMIGFEPDLL HAHDWHTAAI PVLVNTTYAA DPYVGGKATV LSVHNMQHQG 190 200 210 220 230 240 NFYEGLMDVL GIGWEHFTFL GLENNGEANL LKGGLYHATV LNTVSEGYAR EMQTPEYGWG 250 260 270 280 290 300 LDGVVRERAA DLYGILNGVD YEDWNPEVDP YIAARYSAAD LSGKKLCKRD LQRTFGLPER 310 320 330 340 350 360 DDVPLFGMVS RLVKQKGVDI LAEAIHRILA LDVQFVMLGA GEPWTHFYFG DIKNAYPDKF 370 380 390 400 410 420 NIFVGYNNPL SHQIEAGADF FLMPSAFEPC GLNQMYSLRY GTLPIVRATG GLDDSVENFD 430 440 450 460 470 480 EKTLVGTGFK FWSRDAGALF DTVGWAVHTW YHRKDAMERL IANAMAKRFT WEDAAARYED 490 500 LYGRALRKRL GEKEFARRYG KG

References

[1]

"Complete sequence of Geobacter metallireducens GS-15." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Chain P., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P. Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: GS-15 / ATCC 53774 / DSM 7210.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000148 Genomic DNA. Translation: ABB30949.1.
RefSeq	YP_383674.1. NC_007517.1.
3D structure databases
ProteinModelPortal	Q39XS5.
ModBase	Search...
Protein-protein interaction databases
STRING	Q39XS5.
Protein family/group databases
CAZy	GT5. Glycosyltransferase Family 5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3738258.
GenomeReviews	Gene locus Gmet_0707 in contig CP000148_GR.
KEGG	gme:Gmet_0707.
NMPDR	fig|269799.3.peg.734.
PATRIC	22000584. VBIGeoMet55070_0734.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0297.
HOGENOM	HBG596384.
OMA	PTYANET.
PhylomeDB	Q39XS5.
ProtClustDB	CLSK924464.
Enzyme and pathway databases
BioCyc	GMET269799:GMET_0707-MONOMER.
Family and domain databases
HAMAP	MF_00484. Glycogen_synth. [Tree]
InterPro	IPR001296. Glyco_trans_1. IPR011835. Glycogen/starch_synth. IPR013534. Starch_synth_cat_dom. [Graphical view]
KO	K00703.
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. GlgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLGA1_GEOMG

Accession

Primary (citable) accession number: Q39XS5

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 4, 2006
Last sequence update:	November 22, 2005
Last modified:	January 25, 2012
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program