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Q39XS5 (GLGA1_GEOMG) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase 1

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase 1
Gene names
Name:glgA1
Ordered Locus Names:Gmet_0707
OrganismGeobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [Complete proteome] [HAMAP]
Taxonomic identifier269799 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter

Protein attributes

Sequence length502 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 502502Glycogen synthase 1 HAMAP-Rule MF_00484
PRO_0000230241

Sites

Binding site181ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q39XS5 [UniParc].

Last modified November 22, 2005. Version 1.
Checksum: C21743C749EDFE6D

FASTA50256,508
        10         20         30         40         50         60 
MKKLKILMAA SECVPFAKEG GLADVVGVLP KHLARMGHDV RVVMPRYKRV DRERYGLKQL 

        70         80         90        100        110        120 
PGVLVVPMGV IGNQYCGVWE GRIPGSDVPV YFLEHEGYYD RDGLYEVNNE GFLDNDNRFV 

       130        140        150        160        170        180 
FLSKAALELP KMIGFEPDLL HAHDWHTAAI PVLVNTTYAA DPYVGGKATV LSVHNMQHQG 

       190        200        210        220        230        240 
NFYEGLMDVL GIGWEHFTFL GLENNGEANL LKGGLYHATV LNTVSEGYAR EMQTPEYGWG 

       250        260        270        280        290        300 
LDGVVRERAA DLYGILNGVD YEDWNPEVDP YIAARYSAAD LSGKKLCKRD LQRTFGLPER 

       310        320        330        340        350        360 
DDVPLFGMVS RLVKQKGVDI LAEAIHRILA LDVQFVMLGA GEPWTHFYFG DIKNAYPDKF 

       370        380        390        400        410        420 
NIFVGYNNPL SHQIEAGADF FLMPSAFEPC GLNQMYSLRY GTLPIVRATG GLDDSVENFD 

       430        440        450        460        470        480 
EKTLVGTGFK FWSRDAGALF DTVGWAVHTW YHRKDAMERL IANAMAKRFT WEDAAARYED 

       490        500 
LYGRALRKRL GEKEFARRYG KG 

« Hide

References

[1]"Complete sequence of Geobacter metallireducens GS-15."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Chain P., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P.
Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: GS-15 / ATCC 53774 / DSM 7210.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000148 Genomic DNA. Translation: ABB30949.1.
RefSeqYP_006719671.1. NC_007517.1.

3D structure databases

ProteinModelPortalQ39XS5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269799.Gmet_0707.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABB30949; ABB30949; Gmet_0707.
GeneID3738258.
KEGGgme:Gmet_0707.
PATRIC22000584. VBIGeoMet55070_0734.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMACKRELLA.
OrthoDBEOG6JTC6Z.
ProtClustDBCLSK924464.

Enzyme and pathway databases

BioCycGMET269799:GHNY-714-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA1_GEOMG
AccessionPrimary (citable) accession number: Q39XS5
Entry history
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: November 22, 2005
Last modified: February 19, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways