Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

HNH endonuclease family protein

Gene

Gmet_0936

Organism
Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi38ZincCombined sources1
Metal bindingi41ZincCombined sources1
Metal bindingi73ZincCombined sources1
Metal bindingi76ZincCombined sources1

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

EndonucleaseImported, Hydrolase, Nuclease

Keywords - Ligandi

Metal-bindingCombined sources, ZincCombined sources

Enzyme and pathway databases

BioCyciGMET269799:GHNY-953-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
HNH endonuclease family proteinImported
Gene namesi
Ordered Locus Names:Gmet_0936Imported
OrganismiGeobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)Imported
Taxonomic identifieri269799 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter
Proteomesi
  • UP000007073 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi269799.Gmet_0936.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4H9DX-ray2.60A/B/C1-104[»]
ProteinModelPortaliQ39X46.
SMRiQ39X46.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ39X46.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini27 – 78HNHcInterPro annotationAdd BLAST52

Phylogenomic databases

eggNOGiENOG41082KQ. Bacteria.
ENOG4111USP. LUCA.
HOGENOMiHOG000008808.
OMAiCKECNNK.
OrthoDBiPOG091H0A03.

Family and domain databases

InterProiIPR029471. HNH_5.
IPR003615. HNH_nuc.
[Graphical view]
PfamiPF14279. HNH_5. 1 hit.
[Graphical view]
SMARTiSM00507. HNHc. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q39X46-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNYFIVEVSE QEVKREKEKA RELRRSQWWK NRIARGICHY CGEIFPPEEL
60 70 80 90 100
TMDHLVPVVR GGKSTRGNVV PACKECNNRK KYLLPVEWEE YLDSLESEPS

DGEG
Length:104
Mass (Da):12,199
Last modified:November 22, 2005 - v1
Checksum:iCF485E6CB6C4F6BA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000148 Genomic DNA. Translation: ABB31178.1.
RefSeqiWP_004514419.1. NC_007517.1.

Genome annotation databases

EnsemblBacteriaiABB31178; ABB31178; Gmet_0936.
KEGGigme:Gmet_0936.
PATRICi22001062. VBIGeoMet55070_0972.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000148 Genomic DNA. Translation: ABB31178.1.
RefSeqiWP_004514419.1. NC_007517.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4H9DX-ray2.60A/B/C1-104[»]
ProteinModelPortaliQ39X46.
SMRiQ39X46.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi269799.Gmet_0936.

Protocols and materials databases

DNASUi3740092.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABB31178; ABB31178; Gmet_0936.
KEGGigme:Gmet_0936.
PATRICi22001062. VBIGeoMet55070_0972.

Phylogenomic databases

eggNOGiENOG41082KQ. Bacteria.
ENOG4111USP. LUCA.
HOGENOMiHOG000008808.
OMAiCKECNNK.
OrthoDBiPOG091H0A03.

Enzyme and pathway databases

BioCyciGMET269799:GHNY-953-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ39X46.

Family and domain databases

InterProiIPR029471. HNH_5.
IPR003615. HNH_nuc.
[Graphical view]
PfamiPF14279. HNH_5. 1 hit.
[Graphical view]
SMARTiSM00507. HNHc. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ39X46_GEOMG
AccessioniPrimary (citable) accession number: Q39X46
Entry historyi
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: November 2, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.