Q39X46 (Q39X46_GEOMG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
HNH endonuclease family protein EMBL ABB31178.1

Gene names

Ordered Locus Names:

Gmet_0936 EMBL ABB31178.1

Organism

Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [Complete proteome] [HAMAP] EMBL ABB31178.1

Taxonomic identifier

269799 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Desulfuromonadales › Geobacteraceae › Geobacter › Geobacter metallireducens

Protein attributes

Sequence length	104 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Molecular function	Endonuclease EMBL ABB31178.1 Hydrolase Nuclease
Technical term	3D-structure PDB 4H9D Complete proteome
Gene Ontology (GO)
Molecular_function	endonuclease activity Inferred from electronic annotation. Source: UniProtKB-KW nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q39X46 [UniParc]. Last modified November 22, 2005. Version 1. Checksum: CF485E6CB6C4F6BA	FASTA	104	12,199
	10 20 30 40 50 60 MNYFIVEVSE QEVKREKEKA RELRRSQWWK NRIARGICHY CGEIFPPEEL TMDHLVPVVR 70 80 90 100 GGKSTRGNVV PACKECNNRK KYLLPVEWEE YLDSLESEPS DGEG

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete sequence of Geobacter metallireducens GS-15." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Chain P., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P. Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: GS-15 / ATCC 53774 / DSM 7210.
[2]	"Northeast Structural Genomics Consortium Target GmR87." Kuzin A., Chen Y., Seetharaman J., Fang F., Xiao R., Cunningham K., Ma L., Owens L., Chen C.X., Everett J.K., Acton T.B., Montelione G.T., Hunt J.F., Tong L. Submitted (SEP-2012) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.60 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

CP000148 Genomic DNA. Translation: ABB31178.1.

RefSeq

YP_006719903.1. NC_007517.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
4H9D	X-ray	2.60	A/B/C	1-104	[»]

ProteinModelPortal

Q39X46.

SMR

Q39X46. Positions 1-98.

ModBase

Search...

Protein-protein interaction databases

STRING

269799.Gmet_0936.

Protocols and materials databases

DNASU

3740092.

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblBacteria

ABB31178; ABB31178; Gmet_0936.

GeneID

3740092.

KEGG

gme:Gmet_0936.

PATRIC

22001062. VBIGeoMet55070_0972.

Organism-specific databases

CMR

Search...

Phylogenomic databases

eggNOG

NOG69674.

HOGENOM

HOG000008808.

OMA

NVVPACK.

ProtClustDB

CLSK905379.

Enzyme and pathway databases

BioCyc

GMET269799:GHNY-943-MONOMER.

Family and domain databases

InterPro

IPR002711. HNH.
IPR003615. HNH_nuc.
[Graphical view]

Pfam

PF01844. HNH. 1 hit.
[Graphical view]

SMART

SM00507. HNHc. 1 hit.
[Graphical view]

ProtoNet

Search...

Other

EvolutionaryTrace

Q39X46.

Entry information

Entry name

Q39X46_GEOMG

Accession

Primary (citable) accession number: Q39X46

Entry history

Integrated into UniProtKB/TrEMBL:	November 22, 2005
Last sequence update:	November 22, 2005
Last modified:	May 1, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)