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Protein
Submitted name:

Thiamin biosynthesis sulfur carrier protein

Gene

thiS-2

Organism
Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciGMET269799:GHNY-1591-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Thiamin biosynthesis sulfur carrier proteinImported
Gene namesi
Name:thiS-2Imported
Ordered Locus Names:Gmet_1567Imported
OrganismiGeobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)Imported
Taxonomic identifieri269799 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter
Proteomesi
  • UP000007073 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi269799.Gmet_1567.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2K5PNMR-A1-70[»]
3CWIX-ray1.90A1-70[»]
ProteinModelPortaliQ39VC5.
SMRiQ39VC5. Positions 1-69.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ39VC5.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG41067ZN. Bacteria.
ENOG410XUTZ. LUCA.
HOGENOMiHOG000248060.
KOiK03154.
OMAiPDMVSVQ.
OrthoDBiEOG6KMBD9.

Family and domain databases

Gene3Di3.10.20.30. 1 hit.
InterProiIPR012675. Beta-grasp_dom.
IPR016155. Mopterin_synth/thiamin_S_b.
IPR010035. Thi_S.
IPR003749. ThiS/MoaD.
[Graphical view]
PfamiPF02597. ThiS. 1 hit.
[Graphical view]
SUPFAMiSSF54285. SSF54285. 1 hit.
TIGRFAMsiTIGR01683. thiS. 1 hit.

Sequencei

Sequence statusi: Complete.

Q39VC5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNLTVNGKPS TVDGAESLNV TELLSALKVA QAEYVTVELN GEVLEREAFD
60 70
ATTVKDGDAV EFLYFMGGGK
Length:70
Mass (Da):7,454
Last modified:November 22, 2005 - v1
Checksum:i179E2F36A1387921
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000148 Genomic DNA. Translation: ABB31799.1.
RefSeqiWP_004511498.1. NC_007517.1.

Genome annotation databases

EnsemblBacteriaiABB31799; ABB31799; Gmet_1567.
KEGGigme:Gmet_1567.
PATRICi22002354. VBIGeoMet55070_1604.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000148 Genomic DNA. Translation: ABB31799.1.
RefSeqiWP_004511498.1. NC_007517.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2K5PNMR-A1-70[»]
3CWIX-ray1.90A1-70[»]
ProteinModelPortaliQ39VC5.
SMRiQ39VC5. Positions 1-69.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi269799.Gmet_1567.

Protocols and materials databases

DNASUi3738504.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABB31799; ABB31799; Gmet_1567.
KEGGigme:Gmet_1567.
PATRICi22002354. VBIGeoMet55070_1604.

Phylogenomic databases

eggNOGiENOG41067ZN. Bacteria.
ENOG410XUTZ. LUCA.
HOGENOMiHOG000248060.
KOiK03154.
OMAiPDMVSVQ.
OrthoDBiEOG6KMBD9.

Enzyme and pathway databases

BioCyciGMET269799:GHNY-1591-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ39VC5.

Family and domain databases

Gene3Di3.10.20.30. 1 hit.
InterProiIPR012675. Beta-grasp_dom.
IPR016155. Mopterin_synth/thiamin_S_b.
IPR010035. Thi_S.
IPR003749. ThiS/MoaD.
[Graphical view]
PfamiPF02597. ThiS. 1 hit.
[Graphical view]
SUPFAMiSSF54285. SSF54285. 1 hit.
TIGRFAMsiTIGR01683. thiS. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete sequence of Geobacter metallireducens GS-15."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Chain P., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P.
    Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GS-15 / ATCC 53774 / DSM 7210Imported.
  2. "Crystal structure of thiamine biosynthesis protein (ThiS) from Geobacter metallireducens."
    Forouhar F., Abashidze M., Seetharaman J., Mao L., Janjua H., Xiao R., Maglaqui M., Ciccosanti C., Foote E.L., Wang H., Everett J.K., Acton T.B., Montelione G.T., Tong L., Hunt J.F.
    Submitted (APR-2008) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS).
  3. "NMR Solution Structure of a Thiamine Biosynthesis Protein from Geobacter Metallireducens: Northeast Structural Genomics Consortium Target GmR137."
    Mani R., Wang H., Jiang M., Magliaqui M., Xiao R., Nair R., Baran M.C., Gurla S.V.T., Acton T.B., Rost B., Montelione G.T.
    Submitted (JUN-2008) to the PDB data bank
    Cited for: STRUCTURE BY NMR.

Entry informationi

Entry nameiQ39VC5_GEOMG
AccessioniPrimary (citable) accession number: Q39VC5
Entry historyi
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: December 9, 2015
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.