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Protein
Submitted name:

GAF sensor methyl-accepting chemotaxis sensory transducer, class 40H

Gene

mcp40H-1

Organism
Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
GAF sensor methyl-accepting chemotaxis sensory transducer, class 40HImported
Gene namesi
Name:mcp40H-1Imported
Ordered Locus Names:Gmet_1641Imported
OrganismiGeobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)Imported
Taxonomic identifieri269799 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter
Proteomesi
  • UP000007073 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 39HelicalSequence analysisAdd BLAST28
Transmembranei59 – 80HelicalSequence analysisAdd BLAST22

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi269799.Gmet_1641.

Structurei

3D structure databases

ProteinModelPortaliQ39V52.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini339 – 575Methyl-accepting transducerInterPro annotationAdd BLAST237

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000136361.
OMAiATDQITH.
OrthoDBiPOG091H0QRR.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom-like.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF01590. GAF. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q39V52-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDSGAVVKNR SIRYGLFGCI LGISAPIGWT LIRLIFFANP DQSLLSRVFG
60 70 80 90 100
DIVKSPFNIA LYTYMGIGTA GVLAVLGYYI GKTTDELHSR ASELNVLHQE
110 120 130 140 150
VASQKEIFEQ RYRALDSNIK NFHQISSKIQ KSIDIEEVLL LCAEGLHDVL
160 170 180 190 200
GYERVSILMA DEGRSNLSFV ASVGTPDFNP QGVSIPLDIR SGVIFKCFAD
210 220 230 240 250
RQIYMIDDLS TYPADFRLKP PYDAIRALRS RSFVLCPIIV KGESVGVFGI
260 270 280 290 300
DNRQSRRPLN DTDVDTIRLF ADQAASAIIR INLLKAIGTL TSELETTFSD
310 320 330 340 350
LLKNRDHYSR YVVNLKDAVN SVADGTAHIA SAAESVLASV DETSSSVSNI
360 370 380 390 400
YVSIEQVTKN LDYLSESIEK SVSAMEELNS TIKNVEQSAA ISHQVSSKVK
410 420 430 440 450
EEADRGRRVV KETIASLAEI QRSVELSFDA MKRLTENSGR IESIVGVIND
460 470 480 490 500
ITKRTNLLAL NASIIAAQAG EYGKSFGVVA DEIRNLSLQT GQSTGEITGI
510 520 530 540 550
IEEIMNESHS AAQNISASKE LVQKGVELGG VMGQSLQVIH ESSARSLDMT
560 570 580 590 600
QEIKIATEEQ VRSVQLVTHS IENVSSMSSQ IFKASKEQSD AAMSIVRSVD
610 620 630 640 650
TIKEMTQEMV KATVKQVEDG SEIKQSVEAV GEMVTKIFED MEVRRGESSA
660
VVRELEMMKK IAE
Length:663
Mass (Da):72,752
Last modified:November 22, 2005 - v1
Checksum:i9C177CDC5076E1D1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000148 Genomic DNA. Translation: ABB31872.1.
RefSeqiWP_004511423.1. NC_007517.1.

Genome annotation databases

EnsemblBacteriaiABB31872; ABB31872; Gmet_1641.
KEGGigme:Gmet_1641.
PATRICi22002508. VBIGeoMet55070_1680.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000148 Genomic DNA. Translation: ABB31872.1.
RefSeqiWP_004511423.1. NC_007517.1.

3D structure databases

ProteinModelPortaliQ39V52.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi269799.Gmet_1641.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABB31872; ABB31872; Gmet_1641.
KEGGigme:Gmet_1641.
PATRICi22002508. VBIGeoMet55070_1680.

Phylogenomic databases

eggNOGiENOG4105C8Q. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000136361.
OMAiATDQITH.
OrthoDBiPOG091H0QRR.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom-like.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamiPF01590. GAF. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ39V52_GEOMG
AccessioniPrimary (citable) accession number: Q39V52
Entry historyi
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: November 2, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.