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Q39V49

- Q39V49_GEOMG

UniProt

Q39V49 - Q39V49_GEOMG

Protein
Submitted name:

Pyridoxal-5'-phosphate-dependent decarboxylase

Gene

Gmet_1644

Organism
Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 61 (01 Oct 2014)
      Sequence version 1 (22 Nov 2005)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. carboxy-lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciGMET269799:GHNY-1669-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Pyridoxal-5'-phosphate-dependent decarboxylaseImported
    Gene namesi
    Ordered Locus Names:Gmet_1644Imported
    OrganismiGeobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)Imported
    Taxonomic identifieri269799 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfuromonadalesGeobacteraceaeGeobacter
    ProteomesiUP000007073: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi269799.Gmet_1644.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0076.
    HOGENOMiHOG000282553.
    KOiK01580.
    OMAiGMMHNLV.
    OrthoDBiEOG6MSRZP.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q39V49-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPKNRDAARA SLENLYRIFT VPEAPDSTLG AIDQAIAGDV AGFLQTHIVA    50
    IERPLEEIEA DFSSFSIPEE PTYVSEYTEF VKENLVAHSV HTASPAFVGH 100
    MTSALPYFML PLARLMTALN QNVVKVETSK AFTPMERQVL AMLHHLVYGR 150
    NDDFYPQWIH NSQHALGAFC SGGTLANVTA LWVARNRLFA PDGEFRGIAQ 200
    EGLARALKHR GADGIAVLVS ERGHYSLGKA ADLLGIGRDD LIKIKTDANN 250
    RIDLKALREE CRRLQDRNTL PLALVGIAGT TETGNVDPLE AMADLAQELG 300
    CHFHVDAAWG GPTLFSDRHR HLLRGIERAD SVTIDGHKQL YVPMGAGMVV 350
    FKDPTALSAI EHHANYILRH GSKDLGSHTL EGSRPGKAML VHAGFSIIGR 400
    KGYELLIDMG IERARTFADM IQRHPDFELI SEPELNILTY RYCPPAIQQA 450
    LTDATAQQRA AINGLLDQVC QLLQKYQREA GKTFVSRTRL HVARHDMELT 500
    VLRVVLANPL TTDEILEAVL AEQCEIVRLP EIQALLRQAE ELCPGLAKAV 550
    Length:550
    Mass (Da):60,722
    Last modified:November 22, 2005 - v1
    Checksum:i3A6F81B10475A03F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000148 Genomic DNA. Translation: ABB31875.1.
    RefSeqiYP_006720611.1. NC_007517.1.

    Genome annotation databases

    EnsemblBacteriaiABB31875; ABB31875; Gmet_1644.
    GeneIDi3740413.
    KEGGigme:Gmet_1644.
    PATRICi22002514. VBIGeoMet55070_1683.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000148 Genomic DNA. Translation: ABB31875.1 .
    RefSeqi YP_006720611.1. NC_007517.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 269799.Gmet_1644.

    Protocols and materials databases

    DNASUi 3740413.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABB31875 ; ABB31875 ; Gmet_1644 .
    GeneIDi 3740413.
    KEGGi gme:Gmet_1644.
    PATRICi 22002514. VBIGeoMet55070_1683.

    Phylogenomic databases

    eggNOGi COG0076.
    HOGENOMi HOG000282553.
    KOi K01580.
    OMAi GMMHNLV.
    OrthoDBi EOG6MSRZP.

    Enzyme and pathway databases

    BioCyci GMET269799:GHNY-1669-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Geobacter metallireducens GS-15."
      US DOE Joint Genome Institute
      Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Chain P., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P.
      Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: GS-15 / ATCC 53774 / DSM 7210Imported.

    Entry informationi

    Entry nameiQ39V49_GEOMG
    AccessioniPrimary (citable) accession number: Q39V49
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 22, 2005
    Last sequence update: November 22, 2005
    Last modified: October 1, 2014
    This is version 61 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3