Q39U40 (Q39U40_GEOMG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Polysaccharide deacetylase EMBL ABB32234.1

Gene names

Ordered Locus Names:

Gmet_2005

Organism

Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [Complete proteome] [HAMAP]

Taxonomic identifier

269799 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Deltaproteobacteria › Desulfuromonadales › Geobacteraceae › Geobacter

Protein attributes

Sequence length	280 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q39U40 [UniParc]. Last modified November 22, 2005. Version 1. Checksum: 3896DA658B1EA1EF	FASTA	280	32,030
	10 20 30 40 50 60 MLNALSFDIE DWFQVENLKG AIAADSWDTC DLRVVNNTRK ILDLLRRHQT RATFFILGWV 70 80 90 100 110 120 AERCPDLVRE IADAGHEIAS HGYGHELVYT QTPEEFRRDL RRSKEILEGL TGMAVRGYRA 130 140 150 160 170 180 PSFSVNPETP WALDVLVDEG FTYDSSVFPT SFHDRYGFSG SSLSPFRFDN GLVEVPLSTV 190 200 210 220 230 240 RFGGKNIPAA GGGYFRLFPY PFFRYLAKRI NGEGRALVFY LHPWELDPEQ PRIPIRHDYR 250 260 270 280 FRHYVNLCKT GRRLDRLLGD FRFGAMGELV ARVGGKVAEA

References

[1]

"Complete sequence of Geobacter metallireducens GS-15." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Chain P., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P. Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: GS-15 / ATCC 53774 / DSM 7210.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000148 Genomic DNA. Translation: ABB32234.1.
RefSeq	YP_384959.1. NC_007517.1.
3D structure databases
ProteinModelPortal	Q39U40.
ModBase	Search...
Protein-protein interaction databases
STRING	Q39U40.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3739877.
GenomeReviews	Gene locus Gmet_2005 in contig CP000148_GR.
KEGG	gme:Gmet_2005.
NMPDR	fig|269799.3.peg.1618.
PATRIC	22003272. VBIGeoMet55070_2051.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0726.
HOGENOM	HBG612640.
OMA	VEDYFQV.
Family and domain databases
InterPro	IPR022560. DUF3473. IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR014344. PEP-CTERM_polysacc_deacetyl. IPR002509. Polysac_deacetylase. [Graphical view]
Gene3D	G3DSA:3.20.20.370. Polysac_deacetylase. 2 hits.
Pfam	PF11959. DUF3473. 1 hit. PF01522. Polysacc_deac_1. 1 hit. [Graphical view]
SUPFAM	SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
TIGRFAMs	TIGR03006. PepC_polyde. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q39U40_GEOMG

Accession

Primary (citable) accession number: Q39U40

Entry history

Integrated into UniProtKB/TrEMBL:	November 22, 2005
Last sequence update:	November 22, 2005
Last modified:	December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)