Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q39SX5 (Q39SX5_GEOMG) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Methyl-accepting chemotaxis sensory transducer, class 34H EMBL ABB32649.1
Gene names
Name:mcp34H-6 EMBL ABB32649.1
Ordered Locus Names:Gmet_2424 EMBL ABB32649.1
OrganismGeobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [Complete proteome] [HAMAP] EMBL ABB32649.1
Taxonomic identifier269799 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Deltaproteobacteria › Desulfuromonadales › Geobacteraceae › Geobacter ›

Protein attributes

Sequence length581 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral to membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functiontransmembrane signaling receptor activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q39SX5 [UniParc].

Last modified November 22, 2005. Version 1.
Checksum: B64B9B63646E86DE

FASTA58162,160
        10         20         30         40         50         60 
MKLMNNMKIG TKILGLVTLM LAFMMTIAAF GVVKMKGIGE EIAGIDKQDI PLTEAINEVG 

        70         80         90        100        110        120 
KIQMDEMVLF HRAVRLGTNN QQAELKKVEE AFGNKAKEFD ATLKKAEQVV QQALKETAGD 

       130        140        150        160        170        180 
AAVQKEFTEM AERLKVIEKE YNDFEKVTQE LFSTLDAGKF SAVTELEHRV EKEGSDLEQA 

       190        200        210        220        230        240 
IDTFLKNVEK FTNDSVATAE KDEQMAVKAM IGLSLVALVL GLGIGIFISR AITRPLKQGV 

       250        260        270        280        290        300 
DVATRLAGGD LTIAIDVTSK DETGQLLEAM ANMVEKLKIV VADVKSASDN VAAGSQELSS 

       310        320        330        340        350        360 
SSEEMSQGAT EQAAAAEEAS SSMEQMSSNI RQNADNAQQT EKIALKSATD AKEGGKAVGQ 

       370        380        390        400        410        420 
TVNAMKEIAG KISIIEEIAR QTNLLALNAA IEAARAGEHG KGFAVVAAEV RKLAERSQKA 

       430        440        450        460        470        480 
AGEISELSAT SVDVAEKAGE MLERLVPDIQ RTAELVQEIS AACKEQDTGA EQINKAIQQL 

       490        500        510        520        530        540 
DQVIQQNASA SEEMASTSEE LASQAEQLQA TIGFFKVDGS VSGRSASVRK PPAHKVEVKH 

       550        560        570        580 
IASHSANGYV ASASTRKAGS AGVDLDLSSE SDNLDKEFEK F

« Hide

References

[1]"Complete sequence of Geobacter metallireducens GS-15."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Chain P., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P.
Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: GS-15 / ATCC 53774 / DSM 7210.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000148 Genomic DNA. Translation: ABB32649.1.
RefSeqYP_006721385.1. NC_007517.1.

3D structure databases

ProteinModelPortalQ39SX5.
ModBaseSearch...

Protein-protein interaction databases

STRING269799.Gmet_2424.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABB32649; ABB32649; Gmet_2424.
GeneID3738439.
KEGGgme:Gmet_2424.
PATRIC22004100. VBIGeoMet55070_2463.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK03406.
OMAAYEAYVM.

Enzyme and pathway databases

BioCycGMET269799:GHNY-2461-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003122. Chemotax_Me-accpt_rcpt_lig-bd.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
PF02203. TarH. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ39SX5_GEOMG
AccessionPrimary (citable) accession number: Q39SX5
Entry history
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: May 1, 2013
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info