Q39SJ9 (Q39SJ9_GEOMG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Peptidoglycan-binding LysM:Lytic transglycosylase, catalytic EMBL ABB32775.1

Gene names

Ordered Locus Names:

Gmet_2556

Organism

Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) [Complete proteome] [HAMAP]

Taxonomic identifier

269799 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Deltaproteobacteria › Desulfuromonadales › Geobacteraceae › Geobacter

Protein attributes

Sequence length	499 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q39SJ9 [UniParc]. Last modified November 22, 2005. Version 1. Checksum: 3F281D79794819BD	FASTA	499	55,654
	10 20 30 40 50 60 MKKALLLLVL CLFPVLPALA SEPRNSPLKE LAALGNSSSL PDLSGAVPSG FDSRPGRRSG 70 80 90 100 110 120 SLEPSMGDLV VIEDQGAAEN DFELKIPEGP LPDSDIPLTL NGQVEYFIRY FQSSGRKSFT 130 140 150 160 170 180 RWLSRSERYI PMMKEVLKKN GLPEDLVYLA MIESGFTPHA VSVASAVGPW QFISGTGKRY 190 200 210 220 230 240 DLRIDQWIDE RRDPLKSTVA AALYLKELYA MFNNDWYLAA AGYNAGENKI LRAIDRYNTR 250 260 270 280 290 300 DFWEISKGSY LKRETKEYVP KLLAAAIIAK EPARYGFADV AYLPPIEFDT VTIPSRTDLE 310 320 330 340 350 360 VAAKLCNVDY QVVKELNPEL RRWCTPPDYP GYELKIPVGK KRAFEQAYAQ LPEGQRYAER 370 380 390 400 410 420 VVYTRYRAKK RDTLASIASR YGTTPQALAE VNKLKLSAKV RGRTLLVPVV ADREPAVQTA 430 440 450 460 470 480 KADVSRKESA KGFNKYYTVK KGDTIASLSK KFNISSRILT AWNSLKGKLA LRPGKRIIVA 490 KYVEKKGSMV PVSGGDDNG

References

[1]

"Complete sequence of Geobacter metallireducens GS-15." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Di Bartolo G., Chain P., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N., Richardson P. Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: GS-15 / ATCC 53774 / DSM 7210.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000148 Genomic DNA. Translation: ABB32775.1.
RefSeq	YP_385500.1. NC_007517.1.
3D structure databases
ProteinModelPortal	Q39SJ9.
ModBase	Search...
Protein-protein interaction databases
STRING	Q39SJ9.
Protein family/group databases
CAZy	GH23. Glycoside Hydrolase Family 23.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3738860.
GenomeReviews	Gene locus Gmet_2556 in contig CP000148_GR.
KEGG	gme:Gmet_2556.
NMPDR	fig|269799.3.peg.2910.
PATRIC	22004362. VBIGeoMet55070_2594.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0741.
HOGENOM	HBG359010.
OMA	KQNWWYD.
PhylomeDB	Q39SJ9.
ProtClustDB	CLSK828136.
Family and domain databases
InterPro	IPR023346. Lysozyme-like_dom. IPR008258. Lytic_TGlycosylase-like_cat. IPR018392. Peptidoglycan-bd_lysin. IPR002482. Peptidoglycan-bd_Lysin_subgr. [Graphical view]
KO	K08307.
Pfam	PF01476. LysM. 2 hits. PF01464. SLT. 1 hit. [Graphical view]
SMART	SM00257. LysM. 2 hits. [Graphical view]
SUPFAM	SSF53955. SSF53955. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q39SJ9_GEOMG

Accession

Primary (citable) accession number: Q39SJ9

Entry history

Integrated into UniProtKB/TrEMBL:	November 22, 2005
Last sequence update:	November 22, 2005
Last modified:	December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)