SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q39N89

- GLGB_BURS3

UniProt

Q39N89 - GLGB_BURS3

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
1,4-alpha-glucan branching enzyme GlgB
Gene
glgB, Bcep18194_C7032
Organism
Burkholderia sp. (strain 383) (Burkholderia cepacia (strain ATCC 17760 / NCIB 9086 / R18194))
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei414 – 4141Nucleophile By similarity
Active sitei469 – 4691Proton donor By similarity

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciBSP269483:GHLS-7116-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgB (EC:2.4.1.18)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase
Alpha-(1->4)-glucan branching enzyme
Glycogen branching enzyme
Short name:
BE
Gene namesi
Name:glgB
Ordered Locus Names:Bcep18194_C7032
OrganismiBurkholderia sp. (strain 383) (Burkholderia cepacia (strain ATCC 17760 / NCIB 9086 / R18194))
Taxonomic identifieri482957 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
ProteomesiUP000002705: Chromosome 3

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7357351,4-alpha-glucan branching enzyme GlgBUniRule annotation
PRO_0000260639Add
BLAST

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi269483.Bcep18194_C7032.

Structurei

3D structure databases

ProteinModelPortaliQ39N89.
SMRiQ39N89. Positions 124-734.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiAKLLFMG.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q39N89-1 [UniParc]FASTAAdd to Basket

« Hide

MTDTLFERSD IDALLAGRHP DPFACLGPHG QTGQVVVRAV LPGAKSVHAL    50
SPEGAELGTL ACVDRAGCFA GTIPRNGGAP HYLLAIDWPD ARQVIDDAYA 100
FGTLLDDAVL ARFSAGDPAA VLDCLGATPA RIDDTDGVRF AVWAPNAQRV 150
SVVGDFNGWD GRRHPMRLRR PSGVWELFVP GIGAGECYKY ELRAADGRVL 200
PHKSDPCARA TEAPPRTASV VADVAALDAF AWHDEGWMHA RPRADRYRVP 250
WSIYEVHAES WQRVPEEMNR SATWDELAER LIPYVQGMGF THVEFMPIAE 300
YPFGGSWGYQ PVAQFAPSAR FGPVDGFARF VDRAHAAGIG VLVDWVPAHF 350
PDDPHGLAQF DGTALYEHAD PREGLHPDWH TCVFNVGRTE VGAFLAASAL 400
AWARRYHVDG IRVDAVASML YRDYSRAEGE WVPNVHGGRE NLESVAFLRM 450
LNDTLHGAAA PAGVVTVAEE STAWPGVTAP TGDGGLGFDF KWNMGWMHDT 500
LAYVREDPVH RRYHHDRMTF GLVYAFSERF VLPLSHDEVV HGKGSLVAKM 550
PGDAWQRLAT LRAYFGFMWA HPGKKLLFMG SEFAQWAEFA HDATPHWDLL 600
DAPAHRGVQR LVRDLNRTYA AEPALHALDC HAAGFSWLIG DDRDNSVFAF 650
ARRDEAGHLV VAICNFTPVP RASYRVGLPA PGQWRELMNT DAAPYGGTNA 700
GNDGAVWAEA VPAHGEAWSA LLRLPPLATL WLRPA 735
Length:735
Mass (Da):80,677
Last modified:November 22, 2005 - v1
Checksum:i4F416E1A2455363A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000150 Genomic DNA. Translation: ABB06077.1.
RefSeqiWP_011349721.1. NC_007509.1.
YP_366721.1. NC_007509.1.

Genome annotation databases

EnsemblBacteriaiABB06077; ABB06077; Bcep18194_C7032.
GeneIDi3734484.
KEGGibur:Bcep18194_C7032.
PATRICi19282118. VBIBurSp120713_0518.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000150 Genomic DNA. Translation: ABB06077.1 .
RefSeqi WP_011349721.1. NC_007509.1.
YP_366721.1. NC_007509.1.

3D structure databases

ProteinModelPortali Q39N89.
SMRi Q39N89. Positions 124-734.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 269483.Bcep18194_C7032.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABB06077 ; ABB06077 ; Bcep18194_C7032 .
GeneIDi 3734484.
KEGGi bur:Bcep18194_C7032.
PATRICi 19282118. VBIBurSp120713_0518.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi AKLLFMG.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci BSP269483:GHLS-7116-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome 3 of Burkholderia sp. 383."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P.
    Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 383.

Entry informationi

Entry nameiGLGB_BURS3
AccessioniPrimary (citable) accession number: Q39N89
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: November 22, 2005
Last modified: September 3, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi