Q39M80 (Q39M80_BURS3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-dehydro-3-deoxyphosphooctonate aldolase EMBL ABB06436.1
EC=2.5.1.55 EMBL ABB06436.1

Gene names

Ordered Locus Names:

Bcep18194_C7392

Organism

Burkholderia sp. (strain 383) (Burkholderia cepacia (strain ATCC 17760 / NCIB 9086 / R18194)) [Complete proteome] [HAMAP]

Taxonomic identifier

269483 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length	316 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Phosphoenolpyruvate + D-arabinose 5-phosphate + H2O = 2-dehydro-3-deoxy-D-octonate 8-phosphate + phosphate. SAAS SAAS006269
Pathway	Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis. SAAS SAAS006269 Carbohydrate biosynthesis; 3-deoxy-D-manno-octulosonate biosynthesis; 3-deoxy-D-manno-octulosonate from D-ribulose 5-phosphate: step 2/3. SAAS SAAS006269
Subcellular location	Cytoplasm By similarity SAAS SAAS006269.

Ontologies

Keywords
Biological process	Lipopolysaccharide biosynthesis SAAS SAAS006269
Cellular component	Cytoplasm SAAS SAAS006269
Molecular function	Transferase SAAS SAAS006269 EMBL ABB06436.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	lipopolysaccharide biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	3-deoxy-8-phosphooctulonate synthase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q39M80 [UniParc]. Last modified November 22, 2005. Version 1. Checksum: 5E520F9D3EFD97E5	FASTA	316	35,012
	10 20 30 40 50 60 MRPGPPVDSR CRRRDRAVPA GARRARRRFN FVENYMNVSI TPDVTVGNSL PFVLFGGLNV 70 80 90 100 110 120 LESVEFTLYV CSRYVEVTRR LGIPLVFKAS FDKANRSSIH SYRGVGFDEG LRIFEEIKSR 130 140 150 160 170 180 FGVPVITDVH EVWQAEPASH VADVLQVPAF LARQTDLVVA IARTGNAVNI KKPQFMSPTQ 190 200 210 220 230 240 IEHVVSKCRE AGNDKVILCE RGASFGYDNL VVDMLGFRQM RDATGDCPVI FDVTHSLQMR 250 260 270 280 290 300 DPHGAASGGR RRQVLDLARA GMAVGLAGLF LEAHPEPDQA RCDGPSALPL AQLDAFLQQV 310 KAVDDLVKRF PPLDIR

References

[1]

"Complete sequence of chromosome 3 of Burkholderia sp. 383." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P. Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 383.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000150 Genomic DNA. Translation: ABB06436.1.
RefSeq	YP_367080.2. NC_007509.1.
3D structure databases
ProteinModelPortal	Q39M80.
SMR	Q39M80. Positions 43-314.
ModBase	Search...
Protein-protein interaction databases
STRING	Q39M80.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3734307.
GenomeReviews	Gene locus Bcep18194_C7392 in contig CP000150_GR.
KEGG	bur:Bcep18194_C7392.
NMPDR	fig|269483.3.peg.3800.
PATRIC	19282846. VBIBurSp120713_0882.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2877.
HOGENOM	HBG575990.
OMA	QLILCDR.
ProtClustDB	PRK12457.
Family and domain databases
HAMAP	MF_00056. KDO8P_synth. [Tree]
InterPro	IPR013785. Aldolase_TIM. IPR006218. DAHP1/KDSA. IPR006269. KDO8P_synthase. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K01627.
PANTHER	PTHR21057:SF2. KDO8P_synthase. 1 hit.
Pfam	PF00793. DAHP_synth_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR01362. KDO8P_synth. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q39M80_BURS3

Accession

Primary (citable) accession number: Q39M80

Entry history

Integrated into UniProtKB/TrEMBL:	November 22, 2005
Last sequence update:	November 22, 2005
Last modified:	December 14, 2011
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)