Q39KS6 (Q39KS6_BURS3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
TPR repeat protein EMBL ABB06940.1

Gene names

Ordered Locus Names:

Bcep18194_A3338

Organism

Burkholderia sp. (strain 383) (Burkholderia cepacia (strain ATCC 17760 / NCIB 9086 / R18194)) [Complete proteome] [HAMAP]

Taxonomic identifier

269483 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length	595 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Domain	Repeat RuleBase RU003537 TPR repeat RuleBase RU003339
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q39KS6 [UniParc]. Last modified November 22, 2005. Version 1. Checksum: 08452FC89E5895ED	FASTA	595	65,442
	10 20 30 40 50 60 MMPTSPAAAT IEQALAHHQA DRLEEAETLY RQIIDTDPRH ADALHLLGLI GHQYGRYREA 70 80 90 100 110 120 SDLIMAAIEI RPDAMYYYNL GNVMQADNRH AAAAECFRLA IELRPDYVDA YNNLGNALRL 130 140 150 160 170 180 AGDARTAVDA FCQAIALKPD NGQAYNNLAN ALFDLNEIPA ALEAYRHAVA LRPELPEPRS 190 200 210 220 230 240 NLLFASHCSE AFDHDAYLAE AARYDEVVTR CATPWTDWLV DLTARAGRPL KVGIVSGDLK 250 260 270 280 290 300 AHPVGYFIES MLKHLDANRI EMHAYPTRDV EDDVTARIKP AFATWTCIAG LSDEAAAARV 310 320 330 340 350 360 RADRIDVLLD AAGHTVYNRL PLFAWKPAPL QASWPGYFAS TGVRAIDYVI GDRHVLPPTE 370 380 390 400 410 420 AAHFTERPWH LPDSYLCFTP PAEPVDVGAL PMLANGHPTF GYFGKLAKIT DHVVAVWSSV 430 440 450 460 470 480 LRSVAGAKLF VKAEHLDDPR EQQALAARFA AHGIDAQRLI LEGRSPRAEY LAAYRRVDLM 490 500 510 520 530 540 LSPFPYPGGT TTAEALWMGV PVLCRRGERF LSHIAESLLH SARLPGWIAD DDDAYVAKAV 550 560 570 580 590 AQVGQPAELA ALRTTLRAQV LASPLCDAPR FARHFEDALH GMWAQHVEAA PGASV

References

[1]

"Complete sequence of chromosome 1 of Burkholderia sp. 383." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P. Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 383.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000151 Genomic DNA. Translation: ABB06940.1.
RefSeq	YP_367584.1. NC_007510.1.
3D structure databases
ProteinModelPortal	Q39KS6.
ModBase	Search...
Protein-protein interaction databases
STRING	Q39KS6.
Protein family/group databases
CAZy	GT41. Glycosyltransferase Family 41.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3748505.
GenomeReviews	Gene locus Bcep18194_A3338 in contig CP000151_GR.
KEGG	bur:Bcep18194_A3338.
NMPDR	fig|269483.3.peg.4466.
PATRIC	19283897. VBIBurSp120713_1400.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3914.
HOGENOM	HBG684498.
OMA	FCQAIAL.
ProtClustDB	CLSK770198.
Family and domain databases
InterPro	IPR001440. TPR-1. IPR013026. TPR-contain. IPR011990. TPR-like_helical. IPR019734. TPR_repeat. [Graphical view]
Gene3D	G3DSA:1.25.40.10. TPR-like_helical. 1 hit.
Pfam	PF00515. TPR_1. 1 hit. [Graphical view]
SMART	SM00028. TPR. 5 hits. [Graphical view]
PROSITE	PS50005. TPR. 5 hits. PS50293. TPR_REGION. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q39KS6_BURS3

Accession

Primary (citable) accession number: Q39KS6

Entry history

Integrated into UniProtKB/TrEMBL:	November 22, 2005
Last sequence update:	November 22, 2005
Last modified:	December 14, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)