Q39KS4 (Q39KS4_BURS3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
TPR repeat protein EMBL ABB06942.1

Gene names

Ordered Locus Names:

Bcep18194_A3340

Organism

Burkholderia sp. (strain 383) (Burkholderia cepacia (strain ATCC 17760 / NCIB 9086 / R18194)) [Complete proteome] [HAMAP]

Taxonomic identifier

269483 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length	828 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Domain	Repeat RuleBase RU003537 TPR repeat RuleBase RU003339
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q39KS4 [UniParc]. Last modified November 22, 2005. Version 1. Checksum: 5B79423CB31CA5B5	FASTA	828	90,848
	10 20 30 40 50 60 MNDIQDTLQS ALAHHQAGRL AEAKTLYDAI LTAQPGQPDA LHFLGLLACQ LKQYDAGIAL 70 80 90 100 110 120 MEQSLVARPD ASYFNNLGNM LRESGRLDDA IAHYRRAVGL RPDYPEAHNN LGNALRDARE 130 140 150 160 170 180 PTAAMESCAR AIELRPGYAE AYNNLGNALQ DLGEHEAAAA SYAKAVAHQP QYADAYCNLG 190 200 210 220 230 240 NALNAQEKFD DAADAYRRAI ALQPGFRVAH QGLSETLRAA GDLRGAVDHA REGLDPGDAD 250 260 270 280 290 300 AHCVLARLLQ RMSEFDKAVE LLERAIAIDP AHARAWAWLG DLRNQQGEYG QAVQACRHAI 310 320 330 340 350 360 ELDPELADAY NFLGFAYHNL NRLAAAELSY RHAIDLNPDD ADAHQNLAAA LLRLEKLDEA 370 380 390 400 410 420 LKHTEIAREL GIDPLKLQMT LGDILWAKGD LAGALDAFRT AIRYDLHRAY SRMLFNMSSS 430 440 450 460 470 480 PAFEPQEWVA EARRYGEHLE RDAHPFEHDR AQRVARAQGR PLRVGFVSGD LRQHPVGIFL 490 500 510 520 530 540 ESVLARIDRS RIEPHAYVTF VGEDDVTARL RPNFASWKKV VGLGREEAAQ LIRDDGIDIL 550 560 570 580 590 600 IDMAGHTDWS GLPIFGHKPA PVQASWLGFF ATTGCRAIDY FIGDAHTLPA DEAQHFTERP 610 620 630 640 650 660 WRLPDSYLCF TPPPYDVAVG PLPMVAHGGV TFGCFGKLIK ISDEVVALWS RILHALPDAH 670 680 690 700 710 720 LLLKAHELGA DDVNQATLNR FARHGIGADR LILEGGSPRA EYFAAYNRID VALSPFPYPG 730 740 750 760 770 780 GTTTAEALWM GVPVLGMKGG RFVTHICESV LHAAGMGDWI ATDEDAYLTK AVAFARDRDR 790 800 810 820 LATLRATLRA QLLASPLCDA SRFARNLEDA LHGMWACYAS GETAPGGA

References

[1]

"Complete sequence of chromosome 1 of Burkholderia sp. 383." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P. Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 383.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000151 Genomic DNA. Translation: ABB06942.1.
RefSeq	YP_367586.1. NC_007510.1.
3D structure databases
ProteinModelPortal	Q39KS4.
ModBase	Search...
Protein-protein interaction databases
STRING	Q39KS4.
Protein family/group databases
CAZy	GT41. Glycosyltransferase Family 41.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3748507.
GenomeReviews	Gene locus Bcep18194_A3340 in contig CP000151_GR.
KEGG	bur:Bcep18194_A3340.
NMPDR	fig|269483.3.peg.4468.
PATRIC	19283903. VBIBurSp120713_1403.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3914.
HOGENOM	HBG684498.
OMA	RIEPHAY.
ProtClustDB	CLSK770199.
Family and domain databases
InterPro	IPR001440. TPR-1. IPR013026. TPR-contain. IPR011990. TPR-like_helical. IPR019734. TPR_repeat. [Graphical view]
Gene3D	G3DSA:1.25.40.10. TPR-like_helical. 3 hits.
Pfam	PF00515. TPR_1. 7 hits. [Graphical view]
SMART	SM00028. TPR. 9 hits. [Graphical view]
PROSITE	PS50005. TPR. 9 hits. PS50293. TPR_REGION. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q39KS4_BURS3

Accession

Primary (citable) accession number: Q39KS4

Entry history

Integrated into UniProtKB/TrEMBL:	November 22, 2005
Last sequence update:	November 22, 2005
Last modified:	December 14, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)