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Protein

Probable chemoreceptor glutamine deamidase CheD

Gene

cheD

Organism
Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194 / 383)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis.UniRule annotation

Catalytic activityi

Protein L-glutamine + H2O = protein L-glutamate + NH3.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Chemotaxis

Enzyme and pathway databases

BioCyciBSP269483:GHLS-186-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable chemoreceptor glutamine deamidase CheDUniRule annotation (EC:3.5.1.44UniRule annotation)
Gene namesi
Name:cheDUniRule annotation
Ordered Locus Names:Bcep18194_A3362
OrganismiBurkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194 / 383)
Taxonomic identifieri482957 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
Proteomesi
  • UP000002705 Componenti: Chromosome 1

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 241241Probable chemoreceptor glutamine deamidase CheDPRO_0000251016Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ39KQ2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the CheD family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000273194.
KOiK03411.
OrthoDBiEOG6WHNQB.

Family and domain databases

HAMAPiMF_01440. CheD.
InterProiIPR005659. Chemorcpt_Glu_NH3ase_CheD.
IPR011324. Cytotoxic_necrot_fac-like_cat.
[Graphical view]
PfamiPF03975. CheD. 1 hit.
[Graphical view]
SUPFAMiSSF64438. SSF64438. 1 hit.

Sequencei

Sequence statusi: Complete.

Q39KQ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSALPIATNR YFDNHFGRPG VKLLPNEFYT TSEDMVLMTV LGSCVAACLH
60 70 80 90 100
DPYAGIGGMN HFMLPDDGAD PGAAASESMR YGAYAMEVLI NEMIKAGGRR
110 120 130 140 150
ERFEAKVFGG AAVLAGMTTI NIGDRNADFV RRYLALERIR ITAEDLQGVH
160 170 180 190 200
PRKVAFMAAT GRAAVKKLRL QVPGVTEREA ALAREADRAR TARPRPQVEL
210 220 230 240
FAAKRPAAPP PARPRIELFG ARSAAPAGGV RAANLSRKQE A
Length:241
Mass (Da):26,035
Last modified:November 22, 2005 - v1
Checksum:iB6E3FA2FF9EA912C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000151 Genomic DNA. Translation: ABB06964.1.
RefSeqiWP_011350599.1. NC_007510.1.

Genome annotation databases

EnsemblBacteriaiABB06964; ABB06964; Bcep18194_A3362.
KEGGibur:Bcep18194_A3362.
PATRICi19283953. VBIBurSp120713_1428.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000151 Genomic DNA. Translation: ABB06964.1.
RefSeqiWP_011350599.1. NC_007510.1.

3D structure databases

ProteinModelPortaliQ39KQ2.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABB06964; ABB06964; Bcep18194_A3362.
KEGGibur:Bcep18194_A3362.
PATRICi19283953. VBIBurSp120713_1428.

Phylogenomic databases

HOGENOMiHOG000273194.
KOiK03411.
OrthoDBiEOG6WHNQB.

Enzyme and pathway databases

BioCyciBSP269483:GHLS-186-MONOMER.

Family and domain databases

HAMAPiMF_01440. CheD.
InterProiIPR005659. Chemorcpt_Glu_NH3ase_CheD.
IPR011324. Cytotoxic_necrot_fac-like_cat.
[Graphical view]
PfamiPF03975. CheD. 1 hit.
[Graphical view]
SUPFAMiSSF64438. SSF64438. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 1 of Burkholderia sp. 383."
    US DOE Joint Genome Institute
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P.
    Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194 / 383.

Entry informationi

Entry nameiCHED_BURL3
AccessioniPrimary (citable) accession number: Q39KQ2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 3, 2006
Last sequence update: November 22, 2005
Last modified: December 9, 2015
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.