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Q39IN5 (Q39IN5_BURS3) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Bcep18194_A4084 EMBL ABB07681.1
OrganismBurkholderia sp. (strain 383) (Burkholderia cepacia (strain ATCC 17760 / NCIB 9086 / R18194)) [Complete proteome] [HAMAP] EMBL ABB07681.1
Taxonomic identifier482957 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex

Protein attributes

Sequence length511 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q39IN5 [UniParc].

Last modified November 22, 2005. Version 1.
Checksum: 6D3531FDB7D34023

FASTA51153,563
        10         20         30         40         50         60 
MKLSYKIPLA FAVALLLMFC GALYGIHILN RSIDTFAEDV QTNVGDERLV SATLVQFKLQ 

        70         80         90        100        110        120 
VQEWKDTLLR GKQPGKLDQY WQAFQTRERT VDTLAAQLVH QLPPGESRSL VEQFMRAHTA 

       130        140        150        160        170        180 
MGEGYRRGFD AFKAAGFEPS AGDAAVAGVD REPAALLERA AKSIADESAA VSAQASRDAQ 

       190        200        210        220        230        240 
HATTASLVLM LVVLGVAMVG AFLFSRAILR PLDRAVACAQ AVAEGDLTRD VDTAGRDEIA 

       250        260        270        280        290        300 
DLLRALQTMQ ASLSGVVLEV RTHAEAVATA SAQIASGNHD LSARTEAQAA SLEETAASMT 

       310        320        330        340        350        360 
ELTGIVRQSA EHAQHAAQLA HDASNIAAAG GGVMTDAVGT MNGIADSSAK VGEIIAVIDG 

       370        380        390        400        410        420 
IAFQTNILAL NAAVEAARAG EQGRGFAVVA AEVRTLAQRS AAAAKEIKGL IEQSTKRVDE 

       430        440        450        460        470        480 
GAVLIGRAGE SIHEIVGAVQ RVTTIVGEIS SASQEQSGGI QQVNIAVTQM DEATQRNAAL 

       490        500        510 
VEQASAATQA LAEQASALRH AVAVFRLPEM A 

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References

[1]"Complete sequence of chromosome 1 of Burkholderia sp. 383."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P.
Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 383.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000151 Genomic DNA. Translation: ABB07681.1.
RefSeqYP_368325.1. NC_007510.1.

3D structure databases

ProteinModelPortalQ39IN5.
SMRQ39IN5. Positions 284-509.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269483.Bcep18194_A4084.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABB07681; ABB07681; Bcep18194_A4084.
GeneID3749271.
KEGGbur:Bcep18194_A4084.
PATRIC19285496. VBIBurSp120713_2178.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148074.
KOK05874.
OMAPGANTER.
OrthoDBEOG6X6RBP.

Enzyme and pathway databases

BioCycBSP269483:GHLS-927-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ39IN5_BURS3
AccessionPrimary (citable) accession number: Q39IN5
Entry history
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: May 14, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)