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Q39BL5 (Q39BL5_BURS3) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Malate synthase G HAMAP MF_00641
EC=2.3.3.9 HAMAP MF_00641
Gene names
Name:glcB HAMAP MF_00641
Ordered Locus Names:Bcep18194_B0029
OrganismBurkholderia sp. (strain 383) (Burkholderia cepacia (strain ATCC 17760 / NCIB 9086 / R18194)) [Complete proteome] [HAMAP] EMBL ABB10146.1
Taxonomic identifier269483 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length724 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA. HAMAP MF_00641 SAAS SAAS006253

Pathway

Carbohydrate metabolism; glyoxylate cycle; (S)-malate from isocitrate: step 2/2. HAMAP MF_00641 SAAS SAAS006253

Subunit structure

Monomer By similarity. HAMAP MF_00641 SAAS SAAS006253

Subcellular location

Cytoplasm By similarity HAMAP MF_00641.

Sequence similarities

Belongs to the malate synthase family. GlcB subfamily. HAMAP MF_00641

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3361Proton acceptor By similarity HAMAP MF_00641
Active site6291Proton donor By similarity HAMAP MF_00641

Sequences

Sequence LengthMass (Da)Tools
Q39BL5 [UniParc].

Last modified November 22, 2005. Version 1.
Checksum: 20FD0964AFC35205

FASTA72478,513
        10         20         30         40         50         60 
MIDQAGLQVA PALSQFIENE ALPGTGIDKA AFWSGFSALV HDLAPRNREL LAERDRLQQE 

        70         80         90        100        110        120 
LDTWHRAHPG PVRDHAAYRA FLEQIGYLVP VPSNVAAATA NVDSEIATQA GPQLVVPLSN 

       130        140        150        160        170        180 
ARYALNAANA RWGSLYDALY GTDALPEDGG AERTATYNPT RGQRVIDYAR NVLDNAAPLA 

       190        200        210        220        230        240 
SGSHRDALRY RVQDGQLAVE TAKGIVGLAQ PAQFVGYQGA ADAPSAILLK HNGLHLEIQI 

       250        260        270        280        290        300 
DASTPIGRAD LANVKDVVLE AAVSTIIDCE DSVAAVDAED KVQLYRNWLG LMQGTLVEEV 

       310        320        330        340        350        360 
AKGGKSFTRR LNADREYTTP AGGTLSLHGR SLLFVRNVGH LMTNGAVLDR DGNEIPEGIL 

       370        380        390        400        410        420 
DGVVTVLCSL HDLKAKRNSR TGSIYIVKPK MHGPVEVAFA DTLFARIEDL YNLPRNTLKM 

       430        440        450        460        470        480 
GIMDEERRTS VNLAACIAAA AARVAFINTG FLDRTGDEMH TAMEAGPMIR KGDMKSSAWI 

       490        500        510        520        530        540 
QSYERNNVLA GLSAGLRGRA QIGKGMWAMP DLMHAMLEQK IAHPRAGANT AWVPSPTAAT 

       550        560        570        580        590        600 
LHALHYHLVD VQAVQQELEK TPYASERAAL LEGLLTVPVV ERAAWSEAEI LSEVENNAQG 

       610        620        630        640        650        660 
ILGYVVRWVE QGVGCSKVPD IHDVGLMEDR ATLRISSQHI ANWLRHGVIT EAFVLDVFKR 

       670        680        690        700        710        720 
MARVVDQQNA GDPNYRPMAP GYDQSTAFKA ACALALQGTS QPSGYTEPLL HRFRLAFKAQ 


QHGG

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References

[1]"Complete sequence of chromosome 2 of Burkholderia sp. 383."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P.
Submitted (OCT-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 383.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000152 Genomic DNA. Translation: ABB10146.1.
RefSeqYP_370790.1. NC_007511.1.

3D structure databases

ProteinModelPortalQ39BL5.
SMRQ39BL5. Positions 2-715.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ39BL5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3751786.
GenomeReviewsGene locus Bcep18194_B0029 in contig CP000152_GR.
KEGGbur:Bcep18194_B0029.
NMPDRfig|269483.3.peg.938.
PATRIC19290686. VBIBurSp120713_4713.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2225.
HOGENOMHBG350005.
OMAENANWSV.
ProtClustDBPRK02999.

Family and domain databases

HAMAPMF_00641. Malate_synth_G.
[Tree]
InterProIPR011076. Malate_synth-like.
IPR023310. Malate_synth_G_beta_sub_dom.
IPR001465. Malate_synthase.
IPR006253. Malate_synthG.
[Graphical view]
Gene3DG3DSA:2.170.170.11. Malate_synth_G_beta_sub_dom. 2 hits.
KOK01638.
PANTHERPTHR21631:SF1. Malate_synthase. 1 hit.
PfamPF01274. Malate_synthase. 1 hit.
[Graphical view]
SUPFAMSSF51645. Malat_synth_like. 1 hit.
TIGRFAMsTIGR01345. Malate_syn_G. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ39BL5_BURS3
AccessionPrimary (citable) accession number: Q39BL5
Entry history
Integrated into UniProtKB/TrEMBL: November 22, 2005
Last sequence update: November 22, 2005
Last modified: December 14, 2011
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info