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Protein
Submitted name:

Homeodomain protein

Gene
N/A
Organism
Helianthus annuus (Common sunflower)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi92 – 151HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Homeodomain proteinImported
OrganismiHelianthus annuus (Common sunflower)Imported
Taxonomic identifieri4232 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridscampanulidsAsteralesAsteraceaeAsteroideaeHeliantheae allianceHeliantheaeHelianthus

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

Structurei

3D structure databases

ProteinModelPortaliQ39927
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini90 – 150HomeoboxInterPro annotationAdd BLAST61

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili163 – 183Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, HomeoboxPROSITE-ProRule annotationImported

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR003106 Leu_zip_homeo
PfamiView protein in Pfam
PF02183 HALZ, 1 hit
PF00046 Homeobox, 1 hit
SMARTiView protein in SMART
SM00340 HALZ, 1 hit
SM00389 HOX, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS00027 HOMEOBOX_1, 1 hit
PS50071 HOMEOBOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q39927-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDFHGFAEHA LELRLSTTSS VAENTTNPIK KPSPSSDHCL EPSLTLALSG
60 70 80 90 100
DSCGGSSFSI ASAKREREVP SEESERGGEN TSGEEDEDGG VNGKKKLRLT
110 120 130 140 150
KAQSGLLEEA FKLHTTLNPK QKQELARDLK LRPRQVEVWF QNRRARTKLK
160 170 180 190 200
QTEVDCEYLK RCCNTLTDEN QRLRQEVQEL KAQKVSPALY MQLPTTTLTV
210 220 230
CPSCEQIGDT KSATSKNPCT KKPSFFNPFT SSSAAC
Length:236
Mass (Da):26,142
Last modified:November 1, 1996 - v1
Checksum:i5E11872F7E9D5D3D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L48485 mRNA Translation: AAA79778.1
PIRiT12616

Similar proteinsi

Entry informationi

Entry nameiQ39927_HELAN
AccessioniPrimary (citable) accession number: Q39927
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: March 28, 2018
This is version 93 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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