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Protein
Submitted name:

Homeodomain protein

Gene
N/A
Organism
Helianthus annuus (Common sunflower)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Homeodomain proteinImported
OrganismiHelianthus annuus (Common sunflower)Imported
Taxonomic identifieri4232 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridscampanulidsAsteralesAsteraceaeAsteroideaeHeliantheae allianceHeliantheaeHelianthus

Subcellular locationi

  • Nucleus UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliQ39927.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini90 – 15061Homeobox DNA-bindingInterPro annotationAdd
BLAST

Keywords - Domaini

HomeoboxUniRule annotationImported

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
IPR003106. Leu_zip_homeo.
[Graphical view]
PfamiPF02183. HALZ. 1 hit.
PF00046. Homeobox. 1 hit.
[Graphical view]
SMARTiSM00340. HALZ. 1 hit.
SM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q39927-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDFHGFAEHA LELRLSTTSS VAENTTNPIK KPSPSSDHCL EPSLTLALSG
60 70 80 90 100
DSCGGSSFSI ASAKREREVP SEESERGGEN TSGEEDEDGG VNGKKKLRLT
110 120 130 140 150
KAQSGLLEEA FKLHTTLNPK QKQELARDLK LRPRQVEVWF QNRRARTKLK
160 170 180 190 200
QTEVDCEYLK RCCNTLTDEN QRLRQEVQEL KAQKVSPALY MQLPTTTLTV
210 220 230
CPSCEQIGDT KSATSKNPCT KKPSFFNPFT SSSAAC
Length:236
Mass (Da):26,142
Last modified:November 1, 1996 - v1
Checksum:i5E11872F7E9D5D3D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L48485 mRNA. Translation: AAA79778.1.
PIRiT12616.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L48485 mRNA. Translation: AAA79778.1.
PIRiT12616.

3D structure databases

ProteinModelPortaliQ39927.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
IPR003106. Leu_zip_homeo.
[Graphical view]
PfamiPF02183. HALZ. 1 hit.
PF00046. Homeobox. 1 hit.
[Graphical view]
SMARTiSM00340. HALZ. 1 hit.
SM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Proteins containing homeodomains associated to leucine zippers from sunflower."
    Gonzalez D.H., Valle E.M., Gago G., Chan R.L.
    Submitted (OCT-1995) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: RootImported.

Entry informationi

Entry nameiQ39927_HELAN
AccessioniPrimary (citable) accession number: Q39927
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: June 8, 2016
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.