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Protein
Submitted name:

A5A4B3 subunit

Gene

glycinin Gy4

Organism
Glycine soja (Wild soybean)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Seed storage protein.UniRule annotation
This protein found in the seeds of many leguminous and non-leguminous plants is the source of sulfur-containing amino acids in seed meals.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Seed storage proteinUniRule annotation, Storage protein

Names & Taxonomyi

Protein namesi
Submitted name:
A5A4B3 subunitImported
Gene namesi
Name:glycinin Gy4Imported
OrganismiGlycine soja (Wild soybean)Imported
Taxonomic identifieri3848 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2323UniRule annotationAdd
BLAST
Chaini24 – 563540UniRule annotationPRO_5007750901Add
BLAST

Keywords - PTMi

Disulfide bondUniRule annotation

Interactioni

Subunit structurei

Hexamer; each subunit is composed of an acidic and a basic chain derived from a single precursor and linked by a disulfide bond.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliQ39921.
SMRiQ39921. Positions 30-551.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini37 – 250214Cupin_1InterPro annotationAdd
BLAST
Domaini391 – 537147Cupin_1InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the 11S seed storage protein (globulins) family.UniRule annotation

Keywords - Domaini

SignalUniRule annotation

Family and domain databases

Gene3Di2.60.120.10. 3 hits.
InterProiIPR022379. 11S_seedstore_CS.
IPR006044. 11S_seedstore_pln.
IPR006045. Cupin_1.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF00190. Cupin_1. 2 hits.
[Graphical view]
PRINTSiPR00439. 11SGLOBULIN.
SMARTiSM00835. Cupin_1. 2 hits.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 4 hits.
PROSITEiPS00305. 11S_SEED_STORAGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q39921-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKPFTLSLS SLCLLLLSSA CFAISSSKLN ECQLNNLNAL EPDHRVESEG
60 70 80 90 100
GLIQTWNSQH PELKCAGVTV SKLTLNRNGL HLPSYSPYPR MIIIAQGKGA
110 120 130 140 150
LGVAIPGCPE TFEEPQEQSN RRGSRSQKQQ LQDSHQKIRH FNEGDVLVIP
160 170 180 190 200
PGVPYWTYNT GDEPVVAISL LDTSNFNNQL DQTPRVFYLA GNPDIEYPET
210 220 230 240 250
MQQQQQQKSH GGRKQGQHQQ EEEEEGGSVL SGFSKHFLAQ SFNTNEDIAE
260 270 280 290 300
KLQSPDDERK QIVTVEGGLS VISPKWQEQQ DEDEDEDEDD EDEQIPSHPP
310 320 330 340 350
RRPSHGKREQ DEDEDEDEDK PRPSRPSHGK REQDQDQDED EDEDEDQPRK
360 370 380 390 400
SREWRSKKTQ PRRPRQEEPR ERGCETRNGV EENICTLKLH ENIARPSRAD
410 420 430 440 450
FYNPKAGRIS TLNSLTLPAL RQFQLSAQYV VLYKNGIYSP HWNLNANSVI
460 470 480 490 500
YVTRGQGKVR VVNCQGNAVF DGELRRGQLL VVPQNFVVAE QAGEQGFEYI
510 520 530 540 550
VFKTHHNAVT SYLKDVFRAI PSEVLAHSYN LRQSQVSELK YEGNWGPLVN
560
PESQQGSPRV KVA
Length:563
Mass (Da):63,806
Last modified:November 1, 1996 - v1
Checksum:iEC171BED5F2B361F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X86970 mRNA. Translation: CAA60533.1.
PIRiS54802.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X86970 mRNA. Translation: CAA60533.1.
PIRiS54802.

3D structure databases

ProteinModelPortaliQ39921.
SMRiQ39921. Positions 30-551.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.120.10. 3 hits.
InterProiIPR022379. 11S_seedstore_CS.
IPR006044. 11S_seedstore_pln.
IPR006045. Cupin_1.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF00190. Cupin_1. 2 hits.
[Graphical view]
PRINTSiPR00439. 11SGLOBULIN.
SMARTiSM00835. Cupin_1. 2 hits.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 4 hits.
PROSITEiPS00305. 11S_SEED_STORAGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ39921_GLYSO
AccessioniPrimary (citable) accession number: Q39921
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.