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Protein

Ribulose bisphosphate carboxylase small chain

Gene

547605

Organism
Glycine max (Soybean) (Glycine hispida)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.UniRule annotation

Catalytic activityi

2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O.UniRule annotationSAAS annotation
3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyaseUniRule annotationSAAS annotation, MonooxygenaseUniRule annotationSAAS annotation, Oxidoreductase
Biological processCarbon dioxide fixationUniRule annotationSAAS annotation, PhotorespirationUniRule annotationSAAS annotation, PhotosynthesisUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Ribulose bisphosphate carboxylase small chainUniRule annotation (EC:4.1.1.39UniRule annotation)
Gene namesi
Name:547605Imported
ORF Names:GLYMA_19G046600Imported, GLYMA_19G046800Imported
OrganismiGlycine max (Soybean) (Glycine hispida)Imported
Taxonomic identifieri3847 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja
Proteomesi
  • UP000008827 Componenti: Chromosome 19

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

ChloroplastSAAS annotation, Plastid

Interactioni

Subunit structurei

8 large chains + 8 small chains.UniRule annotationSAAS annotation

Protein-protein interaction databases

STRINGi3847.GLYMA19G06370.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini66 – 175RuBisCO_smallInterPro annotationAdd BLAST110

Sequence similaritiesi

Belongs to the RuBisCO small chain family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410IM2H Eukaryota
COG4451 LUCA
KOiK01602
OMAiRISSTGF
OrthoDBiEOG09370XOG

Family and domain databases

Gene3Di3.30.190.10, 1 hit
InterProiView protein in InterPro
IPR024681 RuBisCO_sc
IPR000894 RuBisCO_sc_dom
IPR024680 RuBisCO_ssu_N
IPR036385 RuBisCO_ssu_sf
PfamiView protein in Pfam
PF12338 RbcS, 1 hit
PF00101 RuBisCO_small, 1 hit
PRINTSiPR00152 RUBISCOSMALL
SMARTiView protein in SMART
SM00961 RuBisCO_small, 1 hit
SUPFAMiSSF55239 SSF55239, 1 hit

Sequencei

Sequence statusi: Complete.

Q39832-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASSMISSPA VTTVNRAGAG MVAPFTGLKS MAGFPTRKTN NDITSIASNG
60 70 80 90 100
GRVQCMQVWP PVGKKKFETL SYLPDLDDAQ LAKEVEYLLR KGWIPCLEFE
110 120 130 140 150
LEHGFVYREH NRSPGYYDGR YWTMWKLPMF GCTDASQVLK ELQEAKTAYP
160 170
NGFIRIIGFD NVRQVQCISF IAYKPPGF
Length:178
Mass (Da):20,005
Last modified:November 1, 1996 - v1
Checksum:i566849948665FBD9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACUP02011637 Genomic DNA No translation available.
U39567 mRNA Translation: AAA81328.1
AF303939 mRNA Translation: AAG24882.1
CM000852 Genomic DNA Translation: KRG93867.1
CM000852 Genomic DNA Translation: KRG93871.1
RefSeqiNP_001235266.1, NM_001248337.1
NP_001241137.1, NM_001254208.1
UniGeneiGma.2798
Gma.64193

Genome annotation databases

EnsemblPlantsiKRG93867; KRG93867; GLYMA_19G046600
KRG93871; KRG93871; GLYMA_19G046800
GeneIDi100794277
547605
GrameneiKRG93867; KRG93867; GLYMA_19G046600
KRG93871; KRG93871; GLYMA_19G046800
KEGGigmx:100794277
gmx:547605

Similar proteinsi

Entry informationi

Entry nameiQ39832_SOYBN
AccessioniPrimary (citable) accession number: Q39832
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 23, 2018
This is version 113 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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