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Protein

Ribulose bisphosphate carboxylase small chain

Gene

LOC100794277

Organism
Glycine max (Soybean) (Glycine hispida)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.UniRule annotation

Catalytic activityi

2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O.UniRule annotationSAAS annotation
3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyaseUniRule annotationSAAS annotation, MonooxygenaseUniRule annotationSAAS annotation, Oxidoreductase
Biological processCarbon dioxide fixationUniRule annotationSAAS annotation, PhotorespirationUniRule annotationSAAS annotation, PhotosynthesisUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Ribulose bisphosphate carboxylase small chainUniRule annotation (EC:4.1.1.39UniRule annotation)
Gene namesi
Name:LOC100794277Imported
ORF Names:GLYMA_19G046600Imported, GLYMA_19G046800Imported
OrganismiGlycine max (Soybean) (Glycine hispida)Imported
Taxonomic identifieri3847 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja
Proteomesi
  • UP000008827 Componenti: Chromosome 19

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

ChloroplastSAAS annotation, Plastid

Interactioni

Subunit structurei

8 large chains + 8 small chains.UniRule annotationSAAS annotation

Protein-protein interaction databases

STRINGi3847.GLYMA19G06370.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini66 – 175RuBisCO_smallInterPro annotationAdd BLAST110

Sequence similaritiesi

Belongs to the RuBisCO small chain family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410IM2H. Eukaryota.
COG4451. LUCA.
KOiK01602.
OMAiYREHGNS.
OrthoDBiEOG09370XOG.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiView protein in InterPro
IPR024681. RuBisCO_sc.
IPR000894. RuBisCO_sc_dom.
IPR024680. RuBisCO_ssu_N.
IPR036385. RuBisCO_ssu_sf.
PfamiView protein in Pfam
PF12338. RbcS. 1 hit.
PF00101. RuBisCO_small. 1 hit.
PRINTSiPR00152. RUBISCOSMALL.
SMARTiView protein in SMART
SM00961. RuBisCO_small. 1 hit.
SUPFAMiSSF55239. SSF55239. 1 hit.

Sequencei

Sequence statusi: Complete.

Q39832-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASSMISSPA VTTVNRAGAG MVAPFTGLKS MAGFPTRKTN NDITSIASNG
60 70 80 90 100
GRVQCMQVWP PVGKKKFETL SYLPDLDDAQ LAKEVEYLLR KGWIPCLEFE
110 120 130 140 150
LEHGFVYREH NRSPGYYDGR YWTMWKLPMF GCTDASQVLK ELQEAKTAYP
160 170
NGFIRIIGFD NVRQVQCISF IAYKPPGF
Length:178
Mass (Da):20,005
Last modified:November 1, 1996 - v1
Checksum:i566849948665FBD9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U39567 mRNA. Translation: AAA81328.1.
AF303939 mRNA. Translation: AAG24882.1.
CM000852 Genomic DNA. Translation: KRG93867.1.
CM000852 Genomic DNA. Translation: KRG93871.1.
RefSeqiNP_001235266.1. NM_001248337.1.
NP_001241137.1. NM_001254208.1.
UniGeneiGma.2798.
Gma.64193.

Genome annotation databases

EnsemblPlantsiGLYMA19G06340.1; GLYMA19G06340.1; GLYMA19G06340.
GLYMA19G06370.1; GLYMA19G06370.1; GLYMA19G06370.
GeneIDi100794277.
547605.
GrameneiGLYMA19G06340.1; GLYMA19G06340.1; GLYMA19G06340.
GLYMA19G06370.1; GLYMA19G06370.1; GLYMA19G06370.
KEGGigmx:100794277.

Similar proteinsi

Entry informationi

Entry nameiQ39832_SOYBN
AccessioniPrimary (citable) accession number: Q39832
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: October 25, 2017
This is version 109 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported